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IMGVR_UViG_3300038365_000186-3300038365-Ga0134850_002008_5601_6845
Arc-VirIMGVR_UViG_3300038365_000186-3300038365-Ga0134850_002008_5601_6845
Identity
- Kingdom:
- archaea
Quality
53.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-80_366-409
D2
medium
residues 114-156
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.79 | 63.0 | 5.90e-01 | 90.7% | 85.2% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.69 | 52.0 | 4.25e-01 | 90.7% | 71.3% |
| 1tzzB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.67 | 55.0 | 4.14e-01 | 100.0% | 92.4% |
| 1qasA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 48.0 | 3.86e-01 | 81.4% | 64.8% |
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.65 | 53.0 | 4.04e-01 | 97.7% | 66.1% |
| 2dkzA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.65 | 52.0 | 4.65e-01 | 90.7% | 90.2% |
| 3d1bB00 | 1.20.920.40 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.64 | 52.0 | 4.08e-01 | 100.0% | 95.4% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 50.0 | 3.25e-01 | 100.0% | 68.3% |
| 1z8fA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 3.66e-01 | 97.7% | 67.8% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.59 | 43.0 | 2.77e-01 | 100.0% | 15.2% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.57 | 44.0 | 4.10e-01 | 95.3% | 90.3% |
| 1kw4A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.57 | 44.0 | 3.97e-01 | 97.7% | 88.6% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.57 | 43.0 | 3.81e-01 | 100.0% | 83.7% |
| 2px7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.55 | 43.0 | 2.85e-01 | 95.3% | 37.4% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 40.0 | 3.08e-01 | 100.0% | 72.3% |
| 1adeA02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.53 | 40.0 | 3.34e-01 | 100.0% | 84.0% |
| 7d5qA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 39.0 | 2.70e-01 | 90.7% | 96.2% |
| 2r8cA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 39.0 | 2.45e-01 | 95.3% | 96.4% |
| 3lw7A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 39.0 | 2.71e-01 | 93.0% | 85.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3523492 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.83 | 65.0 | 6.69e-01 | 95.3% | 95.0% |
| 3209145 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.79 | 67.0 | 5.57e-01 | 100.0% | 92.5% |
| 3411625 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 56.0 | 5.96e-01 | 86.0% | 100.0% |
| 3916572 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.77 | 60.0 | 5.85e-01 | 100.0% | 80.0% |
| 3698108 | 386.1.1.59 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zap1_zf1 | 0.77 | 61.0 | 5.44e-01 | 93.0% | 98.5% |
| 3687321 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.76 | 59.0 | 6.07e-01 | 95.3% | 95.0% |
| 3479475 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.76 | 65.0 | 4.07e-01 | 100.0% | 37.4% |
| 3686534 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.72 | 62.0 | 6.15e-01 | 100.0% | 95.6% |
| 3777923 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.71 | 58.0 | 4.20e-01 | 100.0% | 32.0% |
| 5002376 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 57.0 | 4.34e-01 | 90.7% | 41.9% |
| 3556827 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.70 | 56.0 | 5.02e-01 | 100.0% | 92.9% |
| 4115824 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.68 | 56.0 | 3.46e-01 | 93.0% | 39.6% |
| 5032486 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 56.0 | 3.94e-01 | 100.0% | 47.3% |
| 5010036 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 55.0 | 4.07e-01 | 100.0% | 50.8% |
| 3708357 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 53.0 | 5.30e-01 | 97.7% | 100.0% |
| 5081825 | 2006.1.4.49 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_2 | 0.66 | 56.0 | 4.00e-01 | 100.0% | 47.4% |
| 5041191 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 48.0 | 4.68e-01 | 90.7% | 72.0% |
| 5050228 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.65 | 55.0 | 3.99e-01 | 100.0% | 64.3% |
| 3764558 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.62 | 52.0 | 4.32e-01 | 97.7% | 80.0% |
| 4972628 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.61 | 49.0 | 3.52e-01 | 100.0% | 43.3% |
| 3975479 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.59 | 43.0 | 3.13e-01 | 100.0% | 26.2% |
| 4994102 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.59 | 45.0 | 3.32e-01 | 100.0% | 42.6% |
| 3636726 | 386.1.1.228 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_AHC1 | 0.59 | 47.0 | 4.45e-01 | 97.7% | 96.4% |
| 3878856 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.58 | 48.0 | 4.15e-01 | 97.7% | 82.7% |
| 3759686 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.58 | 47.0 | 4.16e-01 | 97.7% | 88.6% |
D3
medium
residues 172-212
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.80 | 66.0 | 5.02e-01 | 90.2% | 41.6% |
| 2nt2A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.78 | 69.0 | 4.72e-01 | 100.0% | 81.7% |
| 8gf5C01 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.76 | 64.0 | 4.46e-01 | 100.0% | 88.7% |
| 4d3pA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.76 | 67.0 | 4.55e-01 | 100.0% | 78.9% |
| 7ncyB01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.75 | 65.0 | 4.67e-01 | 100.0% | 88.4% |
| 1lzwA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.75 | 59.0 | 4.51e-01 | 87.8% | 38.5% |
| 2j16A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.75 | 66.0 | 4.61e-01 | 100.0% | 77.4% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.75 | 65.0 | 5.51e-01 | 100.0% | 68.1% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.73 | 59.0 | 4.25e-01 | 95.1% | 92.1% |
| 3iwgA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.73 | 51.0 | 3.54e-01 | 75.6% | 23.2% |
| 2qjgA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.73 | 54.0 | 3.23e-01 | 78.0% | 79.4% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.72 | 57.0 | 4.49e-01 | 92.7% | 68.1% |
| 2vunA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.71 | 62.0 | 3.78e-01 | 100.0% | 95.0% |
| 6cy5A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.70 | 53.0 | 4.21e-01 | 85.4% | 51.7% |
| 4bw5C00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 56.0 | 3.39e-01 | 87.8% | 42.1% |
| 3f5dA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.68 | 56.0 | 3.72e-01 | 100.0% | 85.0% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.68 | 56.0 | 3.74e-01 | 100.0% | 77.3% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.68 | 54.0 | 3.81e-01 | 92.7% | 79.1% |
| 1uejB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 56.0 | 3.63e-01 | 100.0% | 73.9% |
| 2f6rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 58.0 | 3.60e-01 | 100.0% | 66.1% |
| 3ilvA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 54.0 | 3.23e-01 | 95.1% | 11.9% |
| 1ymyB02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.66 | 58.0 | 3.54e-01 | 100.0% | 94.6% |
| 2cfoA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 51.0 | 3.97e-01 | 95.1% | 41.3% |
| 3kxyT00 | 6.20.290.10 | Special › Other non-globular › Dna Ligase; domain 1 › | 0.65 | 44.0 | 3.83e-01 | 75.6% | 44.6% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.65 | 51.0 | 3.48e-01 | 100.0% | 71.8% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 5.22e-01 | 95.1% | 79.2% |
| 3cx3B01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.64 | 53.0 | 3.73e-01 | 100.0% | 81.2% |
| 4ix7A00 | 1.10.10.2590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › BEN domain | 0.64 | 54.0 | 3.97e-01 | 97.6% | 72.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.64 | 49.0 | 4.24e-01 | 97.6% | 86.1% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.63 | 45.0 | 2.88e-01 | 75.6% | 76.9% |
| 2a8pA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.63 | 51.0 | 3.43e-01 | 100.0% | 36.5% |
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 51.0 | 3.33e-01 | 100.0% | 36.2% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 49.0 | 4.39e-01 | 100.0% | 77.6% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 51.0 | 4.29e-01 | 100.0% | 65.8% |
| 1p6rA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 3.95e-01 | 92.7% | 46.3% |
| 1s1fA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.61 | 48.0 | 2.85e-01 | 100.0% | 21.4% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 49.0 | 3.98e-01 | 92.7% | 62.2% |
| 1nt4A02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.60 | 48.0 | 3.37e-01 | 92.7% | 80.3% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.60 | 50.0 | 3.99e-01 | 97.6% | 47.9% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 47.0 | 3.66e-01 | 92.7% | 51.0% |
| 4o7iA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.60 | 44.0 | 3.03e-01 | 90.2% | 50.5% |
| 8ebtA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 48.0 | 3.26e-01 | 97.6% | 34.1% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 4.66e-01 | 95.1% | 85.4% |
| 2mh2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 4.12e-01 | 95.1% | 62.5% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 48.0 | 3.10e-01 | 100.0% | 36.4% |
| 5zbqA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 40.0 | 2.47e-01 | 73.2% | 25.9% |
| 1rp5A03 | 3.30.70.2110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 45.0 | 3.60e-01 | 92.7% | 53.3% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 38.0 | 3.02e-01 | 70.7% | 37.0% |
| 3igsB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 41.0 | 2.62e-01 | 78.0% | 31.0% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 46.0 | 2.86e-01 | 100.0% | 78.7% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.57 | 42.0 | 3.41e-01 | 95.1% | 38.7% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.57 | 45.0 | 3.24e-01 | 100.0% | 58.6% |
| 2yweA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 3.27e-01 | 100.0% | 34.6% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.56 | 49.0 | 3.00e-01 | 100.0% | 52.3% |
| 3w3sA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 44.0 | 2.60e-01 | 87.8% | 84.1% |
| 4eogA01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.55 | 46.0 | 2.83e-01 | 100.0% | 37.6% |
| 4hjhA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.55 | 45.0 | 3.37e-01 | 97.6% | 89.6% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.55 | 43.0 | 3.03e-01 | 92.7% | 44.3% |
| 1juqC00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 44.0 | 3.03e-01 | 92.7% | 40.9% |
| 2bhvB01 | 2.40.128.260 | Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI | 0.52 | 44.0 | 3.04e-01 | 100.0% | 36.0% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 2.73e-01 | 100.0% | 28.0% |
| 2xzlA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.82e-01 | 100.0% | 25.0% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3472404 | 101.1.15.2 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C | 0.81 | 65.0 | 4.48e-01 | 92.7% | 37.2% |
| 5044754 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.80 | 59.0 | 3.74e-01 | 78.0% | 67.2% |
| 4012761 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.79 | 55.0 | 3.28e-01 | 70.7% | 10.7% |
| 3209145 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.79 | 68.0 | 5.51e-01 | 100.0% | 87.5% |
| 5058906 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 65.0 | 5.20e-01 | 92.7% | 57.5% |
| 3918288 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.79 | 67.0 | 5.17e-01 | 100.0% | 97.9% |
| 4152427 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 71.0 | 5.84e-01 | 100.0% | 84.3% |
| 4044190 | 308.1.1.2 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS | 0.77 | 62.0 | 4.56e-01 | 90.2% | 36.8% |
| 4953863 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.77 | 66.0 | 4.04e-01 | 100.0% | 89.6% |
| 4385951 | 2488.1.1.27 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › PF27379, PF27381, PF27710 | 0.77 | 63.0 | 3.67e-01 | 87.8% | 79.3% |
| 5012273 | 2488.1.1.32 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › PF27381 | 0.77 | 63.0 | 3.60e-01 | 87.8% | 68.2% |
| 4929489 | 101.1.2.897 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_ribbon_2 | 0.76 | 60.0 | 5.22e-01 | 90.2% | 89.2% |
| 4012578 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.75 | 66.0 | 4.33e-01 | 100.0% | 68.0% |
| 3222858 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.75 | 63.0 | 4.09e-01 | 100.0% | 33.3% |
| 3967801 | 2006.1.3.16 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF1835 | 0.75 | 62.0 | 4.01e-01 | 95.1% | 22.2% |
| 4582084 | 132.3.1.0 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ | 0.73 | 62.0 | 5.55e-01 | 100.0% | 78.3% |
| 3502246 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 59.0 | 4.31e-01 | 92.7% | 35.7% |
| 3605554 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 57.0 | 4.50e-01 | 97.6% | 46.3% |
| 5052669 | 2006.1.4.49 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_2 | 0.69 | 60.0 | 4.14e-01 | 100.0% | 42.9% |
| 5078922 | 2006.1.4.49 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_2 | 0.69 | 60.0 | 4.21e-01 | 100.0% | 43.7% |
| 3310491 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 59.0 | 5.19e-01 | 95.1% | 65.0% |
| 3509762 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.69 | 52.0 | 3.75e-01 | 87.8% | 35.6% |
| 5049207 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 4.91e-01 | 95.1% | 67.7% |
| 3588464 | 604.39.1.5 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt | 0.69 | 57.0 | 3.80e-01 | 97.6% | 47.1% |
| 3477278 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 46.0 | 2.99e-01 | 70.7% | 15.6% |
| 4965236 | 101.1.2.952 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29290 | 0.67 | 54.0 | 4.84e-01 | 92.7% | 65.0% |
| 3590232 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.67 | 54.0 | 3.97e-01 | 95.1% | 64.2% |
| 3759371 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 54.0 | 4.40e-01 | 97.6% | 68.5% |
| 5032486 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 56.0 | 3.87e-01 | 100.0% | 45.3% |
| None | — | 0.67 | 56.0 | 3.61e-01 | 100.0% | 72.4% | |
| 3577773 | 2488.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot | 0.67 | 59.0 | 3.69e-01 | 100.0% | 69.5% |
| 5078800 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.67 | 56.0 | 3.87e-01 | 100.0% | 41.3% |
| 4972628 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.66 | 55.0 | 3.83e-01 | 100.0% | 41.3% |
| 3185334 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 55.0 | 3.53e-01 | 100.0% | 64.2% |
| 5065047 | 101.32.1.1 ↗ | alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin › Fer2_BFD | 0.65 | 56.0 | 3.94e-01 | 100.0% | 47.9% |
| 4994102 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.65 | 54.0 | 3.72e-01 | 100.0% | 40.0% |
| 3498569 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 53.0 | 4.04e-01 | 97.6% | 68.6% |
| 224085 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.64 | 54.0 | 3.97e-01 | 97.6% | 72.8% |
| 3172982 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.63 | 53.0 | 3.58e-01 | 92.7% | 25.0% |
| 3416186 | 3855.1.1.2 ↗ | alpha arrays › Serum amyloid A-1 protein › Serum amyloid A-1 protein › Serum amyloid A-1 protein › DM4_12 | 0.63 | 53.0 | 3.78e-01 | 100.0% | 49.3% |
| 4466183 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.63 | 54.0 | 4.09e-01 | 100.0% | 65.7% |
| 4321877 | 101.1.1.311 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TYA | 0.63 | 49.0 | 4.01e-01 | 90.2% | 78.6% |
| 5059610 | 148.1.3.403 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RNA_pol_Rpb1_5 | 0.63 | 43.0 | 2.92e-01 | 73.2% | 27.1% |
| 4223134 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.63 | 49.0 | 3.39e-01 | 95.1% | 26.8% |
| 3708059 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 53.0 | 3.13e-01 | 100.0% | 52.9% |
| 4968923 | 2006.1.4.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 | 0.63 | 52.0 | 3.75e-01 | 100.0% | 47.7% |
| 4503189 | 589.1.2.1 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C | 0.62 | 47.0 | 3.17e-01 | 87.8% | 45.7% |
| 3958582 | 101.1.1.282 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF222 | 0.62 | 49.0 | 3.49e-01 | 97.6% | 31.3% |
| 3393516 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.62 | 53.0 | 3.96e-01 | 97.6% | 75.5% |
| 4862621 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.62 | 47.0 | 3.03e-01 | 87.8% | 76.9% |
| 4519499 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.61 | 50.0 | 3.67e-01 | 100.0% | 73.1% |
| 4956528 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.61 | 46.0 | 2.89e-01 | 85.4% | 33.5% |
| 3175252 | 109.3.1.159 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › RPT | 0.60 | 44.0 | 2.68e-01 | 85.4% | 68.7% |
| 3987894 | 181.2.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › CtsR dimerization domain › CtsR dimerization domain › CtsR_C | 0.60 | 44.0 | 3.86e-01 | 85.4% | 60.0% |
| None | — | 0.59 | 48.0 | 2.86e-01 | 100.0% | 18.9% | |
| 5049352 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.59 | 49.0 | 3.85e-01 | 100.0% | 89.0% |
| 5081218 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.59 | 47.0 | 3.42e-01 | 100.0% | 43.6% |
| 5075793 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.59 | 47.0 | 2.98e-01 | 90.2% | 89.4% |
| 4438239 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.58 | 44.0 | 3.04e-01 | 95.1% | 24.3% |
| 3964254 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.56 | 46.0 | 3.27e-01 | 100.0% | 51.3% |
| 4933155 | 198.1.1.27 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 | 0.56 | 43.0 | 3.56e-01 | 92.7% | 54.1% |
| 3608344 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.55 | 43.0 | 3.14e-01 | 100.0% | 60.0% |
| 3540527 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 42.0 | 3.54e-01 | 92.7% | 47.5% |
| 5030079 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.54 | 44.0 | 2.51e-01 | 100.0% | 14.9% |
| 5050798 | 2004.1.1.67 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA | 0.54 | 41.0 | 2.55e-01 | 70.7% | 11.4% |
| 3486574 | 101.1.1.50 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Nop16 | 0.54 | 42.0 | 3.85e-01 | 95.1% | 65.0% |
| 3592955 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 42.0 | 2.63e-01 | 92.7% | 66.2% |
| 3488933 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 37.0 | 3.34e-01 | 92.7% | 67.1% |
| 3773998 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 42.0 | 2.58e-01 | 100.0% | 18.7% |