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IMGVR_UViG_3300038365_000206-3300038365-Ga0134850_000025_58048_59088
Arc-VirIMGVR_UViG_3300038365_000206-3300038365-Ga0134850_000025_58048_59088
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-43_106-132_151-173
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 34.0 | 3.89e-01 | 76.3% | 63.4% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.66 | 33.0 | 3.53e-01 | 77.4% | 53.6% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 36.0 | 3.87e-01 | 86.0% | 69.1% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.59 | 36.0 | 4.02e-01 | 86.0% | 77.0% |
| 1txoB00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 48.0 | 3.54e-01 | 93.5% | 98.3% |
| 3ci0J01 | 3.10.610.10 | Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like | 0.53 | 33.0 | 3.24e-01 | 82.8% | 56.7% |
| 1xd3C00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.52 | 44.0 | 3.34e-01 | 92.5% | 80.6% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.52 | 47.0 | 3.43e-01 | 100.0% | 85.5% |
| 2durB01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.30e-01 | 92.5% | 71.6% |
| 7erlA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.44e-01 | 90.3% | 65.9% |
| 3a7sA00 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.50 | 42.0 | 3.29e-01 | 91.4% | 78.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.85 | 77.0 | 6.62e-01 | 94.6% | 100.0% |
| 4284036 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.75 | 34.0 | 3.24e-01 | 79.6% | 38.1% |
| 3972316 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.68 | 31.0 | 3.69e-01 | 77.4% | 61.5% |
| 4082107 | 7089.1.1.3 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD | 0.68 | 34.0 | 3.83e-01 | 79.6% | 61.4% |
| 5082246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 33.0 | 4.06e-01 | 78.5% | 75.0% |
| 4032029 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 34.0 | 3.39e-01 | 84.9% | 51.6% |
| 4108772 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.59 | 32.0 | 3.57e-01 | 78.5% | 65.3% |
| 5079197 | 375.1.1.298 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM | 0.59 | 31.0 | 4.13e-01 | 80.6% | 98.0% |
| 3583988 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.57 | 35.0 | 3.35e-01 | 88.2% | 52.7% |
| 3625532 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.55 | 30.0 | 3.20e-01 | 78.5% | 61.3% |
| 5082492 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 38.0 | 4.00e-01 | 79.6% | 80.0% |
| 3728174 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.54 | 41.0 | 3.40e-01 | 81.7% | 97.6% |
| 2048183 | 10.1.1.50 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Dit-like_CBM2 | 0.52 | 44.0 | 3.31e-01 | 92.5% | 61.7% |
| 3723821 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.51 | 38.0 | 3.26e-01 | 79.6% | 68.4% |
| 3702738 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 44.0 | 3.53e-01 | 94.6% | 78.9% |
| 3623296 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.51 | 44.0 | 3.61e-01 | 95.7% | 78.2% |
| 4243201 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.50 | 43.0 | 3.42e-01 | 92.5% | 59.5% |
| 3924548 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 32.0 | 3.10e-01 | 91.4% | 55.2% |
| 4002267 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.50 | 44.0 | 3.66e-01 | 95.7% | 83.1% |
D2
medium
residues 64-105_133-150_174-340
Domain cluster:
rep: KX365748.1__ANY29585.1__X__00020__D206-385
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.66 | 42.0 | 4.96e-01 | 71.4% | 91.0% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.65 | 40.0 | 4.78e-01 | 70.5% | 87.5% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 33.0 | 4.44e-01 | 79.3% | 90.3% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 36.0 | 4.51e-01 | 83.3% | 100.0% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.58 | 24.0 | 3.85e-01 | 85.5% | 96.8% |
| 2wyhA05 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 25.0 | 3.20e-01 | 94.7% | 71.6% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.53 | 19.0 | 3.16e-01 | 85.5% | 90.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954552 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 57.0 | 6.86e-01 | 70.0% | 100.0% |
| 2674670 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.77 | 47.0 | 5.41e-01 | 70.5% | 80.2% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.75 | 50.0 | 5.90e-01 | 70.0% | 94.4% |
| 3943316 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.73 | 50.0 | 5.92e-01 | 79.3% | 98.1% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 36.0 | 4.83e-01 | 70.0% | 88.8% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.68 | 64.0 | 5.97e-01 | 96.9% | 81.9% |
| 3265120 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 41.0 | 4.62e-01 | 71.4% | 100.0% |
| 3264744 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.57 | 40.0 | 4.59e-01 | 71.4% | 100.0% |
| 3806422 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.55 | 20.0 | 3.08e-01 | 86.8% | 81.2% |
| 2595266 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.54 | 28.0 | 3.53e-01 | 89.9% | 81.5% |
| 3306545 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.52 | 19.0 | 2.96e-01 | 87.2% | 82.4% |