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IMGVR_UViG_3300038420_000357-3300038420-Ga0427954_0023699_3_650

Arc-Vir

IMGVR_UViG_3300038420_000357-3300038420-Ga0427954_0023699_3_650

Quality

87.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 73-122
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.71 47.0 3.20e-01 70.0% 40.7%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 54.0 3.40e-01 100.0% 16.7%
2ky8A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.64 49.0 4.38e-01 84.0% 67.1%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.60e-01 84.0% 98.3%
5yk4A04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.62 50.0 3.81e-01 96.0% 46.3%
4huzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 41.0 2.86e-01 70.0% 21.7%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.61 51.0 3.93e-01 96.0% 86.4%
5tdeA01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.61 47.0 3.40e-01 86.0% 43.0%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.60 46.0 3.39e-01 88.0% 42.6%
2q04F00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 43.0 2.94e-01 80.0% 28.1%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.58 48.0 3.93e-01 100.0% 89.5%
4zdoB00 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.58 48.0 2.84e-01 100.0% 20.7%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 45.0 3.47e-01 92.0% 45.7%
4jlxA02 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.57 47.0 3.37e-01 96.0% 40.5%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 41.0 2.58e-01 80.0% 15.6%
1vrmA01 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.56 43.0 2.99e-01 92.0% 21.6%
1cdwA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 45.0 3.87e-01 94.0% 89.5%
3agrA01 3.30.420.530 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.56 49.0 3.20e-01 100.0% 49.3%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.55 45.0 3.71e-01 96.0% 55.9%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 45.0 2.97e-01 92.0% 44.7%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.55 43.0 3.27e-01 96.0% 96.6%
2e7jA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 45.0 3.52e-01 96.0% 63.4%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.75e-01 92.0% 37.9%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.54 41.0 3.30e-01 90.0% 74.8%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.54 42.0 3.17e-01 90.0% 65.9%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 3.46e-01 84.0% 77.0%
8ckpA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 41.0 2.76e-01 100.0% 42.6%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.52 37.0 3.57e-01 76.0% 67.2%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 35.0 3.37e-01 72.0% 83.3%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.52 39.0 2.64e-01 88.0% 23.9%
4e6xB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 41.0 2.65e-01 100.0% 71.8%
4q05A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 2.62e-01 100.0% 65.7%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4989878 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.78 68.0 3.85e-01 100.0% 9.7%
4112414 2004.1.1.301 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 0.77 65.0 3.95e-01 100.0% 16.1%
4991900 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.75 64.0 3.83e-01 100.0% 14.8%
3388135 4292.2.1.1 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG 0.73 60.0 5.31e-01 94.0% 68.0%
3298515 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.73 62.0 4.81e-01 100.0% 90.4%
5037511 2004.1.1.293 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 0.71 58.0 3.42e-01 94.0% 13.1%
4954892 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.68 57.0 3.50e-01 100.0% 14.1%
4122796 2004.1.1.1154 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, SbcC_Walker_B 0.67 58.0 3.37e-01 100.0% 11.0%
5052009 4160.1.1.1 beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Peptidase_M29 0.66 55.0 3.79e-01 100.0% 75.8%
1067600 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.66 45.0 4.19e-01 72.0% 65.1%
3470520 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 53.0 4.29e-01 90.0% 51.6%
4661064 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.65 44.0 4.22e-01 72.0% 62.7%
4946684 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.65 54.0 3.35e-01 100.0% 18.6%
5076987 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.64 53.0 3.32e-01 100.0% 21.0%
5028555 4292.2.1.0 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.64 51.0 4.82e-01 96.0% 78.5%
3597940 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.64 51.0 4.23e-01 90.0% 54.4%
4121534 601.23.1.4 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.63 53.0 3.25e-01 96.0% 19.1%
2491500 5.1.7.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR_6, Sortilin-Vps10 0.63 52.0 2.96e-01 92.0% 19.7%
3804264 64.1.1.8 beta meanders › WW domain-like › WW domain › WW domain › DUF7028 0.62 47.0 3.98e-01 84.0% 89.4%
4817079 327.11.2.5 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_8 0.62 51.0 4.39e-01 94.0% 63.4%
3176989 601.19.1.40 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › PF28954 0.62 47.0 3.35e-01 84.0% 75.0%
4426204 331.23.1.7 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF73-100_C 0.62 41.0 3.45e-01 88.0% 40.0%
4946341 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.61 42.0 2.75e-01 88.0% 15.1%
5072660 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.06e-01 88.0% 54.1%
3839057 2004.1.1.714 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_13 0.60 50.0 3.18e-01 100.0% 17.1%
4008693 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.59 40.0 3.73e-01 76.0% 55.4%
5061404 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 47.0 3.02e-01 100.0% 55.4%
4319401 2003.1.2.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.58 50.0 3.03e-01 100.0% 29.7%
3268244 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.57 45.0 3.41e-01 98.0% 90.3%
3945545 4317.1.1.1 a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like › DUF1398 0.57 41.0 3.95e-01 84.0% 67.7%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.57 44.0 3.09e-01 88.0% 90.9%
4955531 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.55 44.0 2.74e-01 90.0% 58.4%
4053985 316.1.1.5 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS 0.55 44.0 3.21e-01 90.0% 31.0%
4976626 3714.1.1.0 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.55 48.0 3.12e-01 100.0% 35.6%
4526481 7575.1.1.2 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 0.55 46.0 3.19e-01 100.0% 65.3%
3356481 386.1.1.117 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › DUF7028 0.55 46.0 4.00e-01 100.0% 72.3%
5023929 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 42.0 3.57e-01 86.0% 71.8%
None 0.54 45.0 2.79e-01 100.0% 33.0%
4272765 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.54 45.0 2.78e-01 100.0% 29.7%
4965077 4161.1.1.2 beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N 0.53 41.0 2.66e-01 90.0% 31.9%
3626364 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.53 44.0 3.35e-01 92.0% 43.5%
3364540 2.11.1.2 beta barrels › OB-fold › Antifungal protein (AGAFP) › Antifungal protein (AGAFP) › WAK_assoc 0.53 35.0 3.74e-01 90.0% 100.0%
4927372 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 46.0 3.56e-01 100.0% 54.8%
4659931 2003.1.2.99 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 0.53 46.0 2.78e-01 100.0% 26.5%
5041236 375.13.1.1 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt 0.52 40.0 3.93e-01 84.0% 100.0%
3584392 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.52 44.0 2.95e-01 100.0% 75.8%
3781932 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 43.0 2.60e-01 100.0% 16.4%
3975813 223.3.1.2 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.51 38.0 2.77e-01 88.0% 50.6%
1106759 284.2.1.0 a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.50 34.0 2.92e-01 82.0% 39.6%
D2 medium residues 123-215
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ahdC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 65.0 4.71e-01 94.6% 33.6%
2cvhA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 69.0 5.24e-01 97.8% 54.7%
1xexB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 68.0 5.59e-01 100.0% 55.9%
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 67.0 5.00e-01 97.8% 51.9%
4tvsA00 3.40.50.12190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.75 63.0 4.70e-01 90.3% 55.4%
3gfoA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 69.0 4.95e-01 100.0% 37.1%
4ydsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 66.0 4.91e-01 97.8% 46.0%
3d31A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 62.0 4.65e-01 96.8% 39.4%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 61.0 4.72e-01 97.8% 46.2%
7uehA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.69 49.0 4.52e-01 83.9% 58.1%
3bc9A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 58.0 4.15e-01 96.8% 37.8%
2ozlB01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.68 58.0 4.57e-01 94.6% 52.3%
3thxB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 4.37e-01 100.0% 63.4%
3ii1A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.67 58.0 3.81e-01 96.8% 45.8%
1e43A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.66 56.0 4.02e-01 96.8% 38.4%
4j3vA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 57.0 3.55e-01 100.0% 61.0%
1fnnA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 4.36e-01 89.2% 62.1%
2xauA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 53.0 4.00e-01 89.2% 53.0%
6imeA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.65 55.0 4.02e-01 94.6% 53.8%
3no4A00 3.40.50.10310 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Creatininase 0.65 48.0 3.48e-01 78.5% 90.2%
4ml9A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 55.0 3.95e-01 94.6% 44.6%
7paxA01 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.64 55.0 4.04e-01 96.8% 87.2%
1gg4A01 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.64 50.0 4.44e-01 88.2% 58.1%
4eacC01 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.63 54.0 3.97e-01 97.8% 47.9%
2awnD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 45.0 3.91e-01 79.6% 48.3%
5khaB01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.62 54.0 3.89e-01 94.6% 45.0%
1f75A00 3.40.1180.10 Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like 0.62 53.0 4.05e-01 94.6% 59.4%
2uv8A01 3.90.25.70 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › 0.60 42.0 4.29e-01 93.5% 74.2%
5c5cA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 4.09e-01 97.8% 51.8%
2xadA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.59 49.0 3.66e-01 94.6% 93.4%
4wzzA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 49.0 4.19e-01 97.8% 55.3%
2fqxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 50.0 4.06e-01 97.8% 48.1%
3gv0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 43.0 3.92e-01 95.7% 55.6%
5fbhA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 50.0 4.03e-01 95.7% 83.4%
3rotA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 44.0 3.95e-01 89.2% 55.5%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 49.0 4.21e-01 95.7% 80.0%
2o20A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 43.0 3.86e-01 94.6% 54.7%
3g1wA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 46.0 4.05e-01 97.8% 56.8%
2bx2L02 3.40.1260.20 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain 0.58 47.0 4.52e-01 90.3% 82.7%
4ry8C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 49.0 4.14e-01 98.9% 54.8%
1vlpA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.57 48.0 3.17e-01 93.5% 27.8%
5braA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 42.0 3.77e-01 87.1% 53.7%
6lkzC01 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.57 47.0 3.20e-01 92.5% 30.8%
3blvC00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.57 48.0 3.29e-01 92.5% 37.3%
3qi7A02 3.40.50.11390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 50.0 4.11e-01 97.8% 61.1%
3h5oA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 45.0 3.96e-01 96.8% 56.9%
2d1cA01 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.56 47.0 3.17e-01 92.5% 33.3%
3bblA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 45.0 4.03e-01 97.8% 59.4%
3k4hA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 43.0 3.81e-01 92.5% 54.9%
6znjB01 3.40.50.10950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 43.0 3.75e-01 83.9% 55.5%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.55 45.0 3.12e-01 89.2% 33.4%
2vk2A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 47.0 3.97e-01 98.9% 58.2%
3hhsA01 1.20.1370.10 Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain 0.55 38.0 3.34e-01 72.0% 55.9%
3cs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 43.0 3.84e-01 96.8% 58.7%
4rsmA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 42.0 3.71e-01 97.8% 54.7%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 45.0 3.90e-01 97.8% 57.2%
1a3cA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 39.0 3.25e-01 96.8% 43.4%
5f2hA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 45.0 3.70e-01 95.7% 80.0%
1vkcA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 40.0 3.59e-01 82.8% 91.4%
3l49A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 43.0 3.81e-01 95.7% 58.5%
5bqpD00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 39.0 3.23e-01 96.8% 42.6%
1cw1A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.52 43.0 2.83e-01 92.5% 79.8%
5ib0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 42.0 3.75e-01 92.5% 88.3%
3egcD02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 42.0 3.85e-01 95.7% 81.4%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3983802 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.86 71.0 7.29e-01 95.7% 90.0%
3958092 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.78 69.0 5.65e-01 100.0% 55.0%
4294357 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.77 71.0 5.80e-01 100.0% 59.4%
4989686 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.76 68.0 5.37e-01 96.8% 51.4%
3926149 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.75 68.0 5.70e-01 97.8% 61.3%
3582919 2004.1.1.303 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC2_membrane_7 0.75 69.0 5.40e-01 100.0% 50.3%
3581097 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 60.0 4.51e-01 86.0% 38.1%
3382550 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 66.0 4.97e-01 100.0% 41.4%
4237550 2004.1.1.348 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SbcC_Walker_B 0.73 64.0 5.04e-01 93.5% 53.9%
5007981 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.73 64.0 4.87e-01 96.8% 45.4%
5031232 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.72 66.0 5.71e-01 100.0% 72.9%
3999097 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 65.0 5.28e-01 100.0% 54.9%
3497625 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 61.0 5.18e-01 93.5% 92.7%
3431509 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 64.0 5.09e-01 100.0% 51.9%
4991830 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 62.0 4.86e-01 96.8% 47.7%
3957668 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.70 63.0 6.20e-01 100.0% 95.0%
4855248 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.70 62.0 6.00e-01 100.0% 87.7%
4569254 2007.1.2.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF3798 0.68 49.0 3.95e-01 88.2% 38.9%
4538970 2004.1.1.90 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CobA_CobO_BtuR 0.68 54.0 4.31e-01 89.2% 42.0%
3641633 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.66 55.0 4.73e-01 90.3% 69.7%
3659883 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 50.0 4.96e-01 83.9% 77.0%
3583330 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.65 51.0 3.79e-01 84.9% 49.2%
5041869 246.1.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.64 55.0 3.91e-01 95.7% 91.2%
4134799 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.64 53.0 3.96e-01 93.5% 60.4%
None 0.64 52.0 3.86e-01 89.2% 51.4%
4099134 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.64 54.0 4.08e-01 94.6% 62.1%
3202677 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.64 51.0 3.96e-01 87.1% 63.8%
3476024 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.64 53.0 4.44e-01 93.5% 73.2%
3845436 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.63 52.0 4.01e-01 89.2% 61.9%
5074452 2002.1.1.32 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN 0.62 54.0 3.78e-01 98.9% 42.8%
1172988 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.60 45.0 4.01e-01 88.2% 55.1%
5031973 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.60 46.0 3.74e-01 84.9% 63.7%
4661523 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.59 46.0 3.84e-01 83.9% 78.8%
3997975 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 51.0 3.88e-01 97.8% 61.7%
4261822 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.59 49.0 4.02e-01 97.8% 47.6%
3241495 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 51.0 4.06e-01 100.0% 64.4%
3580593 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.59 47.0 3.43e-01 91.4% 41.0%
5079688 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 50.0 4.00e-01 97.8% 52.8%
1481999 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.58 42.0 3.80e-01 83.9% 55.0%
4989892 7592.1.1.5 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csx1_CARF 0.58 43.0 2.99e-01 79.6% 66.0%
3471946 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.58 42.0 3.86e-01 90.3% 59.2%
1253014 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.57 42.0 3.85e-01 86.0% 56.5%
3278213 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.57 49.0 4.16e-01 98.9% 63.0%
3250925 2003.4.1.0 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes 0.57 46.0 3.63e-01 91.4% 83.7%
3413188 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.57 48.0 3.94e-01 98.9% 66.3%
3803369 7510.1.1.0 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.57 45.0 4.12e-01 84.9% 82.5%
4931426 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.56 46.0 3.75e-01 89.2% 83.3%
1147798 2007.1.2.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF3798 0.56 49.0 4.05e-01 95.7% 61.0%
3393975 2003.1.5.97 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_32 0.56 47.0 3.25e-01 95.7% 62.5%
3789539 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.56 45.0 4.01e-01 86.0% 75.4%
4928103 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.55 46.0 3.20e-01 92.5% 37.0%
4197082 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.55 46.0 3.76e-01 90.3% 52.4%
3787994 7567.1.1.1 a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L 0.55 42.0 2.96e-01 82.8% 73.9%
4947633 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.54 45.0 3.70e-01 90.3% 64.7%
1173110 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.54 41.0 3.67e-01 89.2% 57.4%
4078661 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 44.0 2.93e-01 93.5% 63.5%
4999880 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.54 45.0 3.67e-01 90.3% 65.9%
3926158 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.54 48.0 3.91e-01 100.0% 73.1%
4031883 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.54 44.0 3.83e-01 95.7% 56.1%
3397477 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.54 44.0 3.84e-01 90.3% 62.1%
4973306 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.54 44.0 3.83e-01 90.3% 62.1%
5057923 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.53 43.0 3.52e-01 92.5% 64.6%
3517799 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.53 38.0 3.02e-01 90.3% 34.3%
4015641 7510.1.1.0 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.52 43.0 3.72e-01 90.3% 60.0%
3963430 7510.1.1.4 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › IDH 0.52 43.0 2.85e-01 90.3% 42.7%
3477207 4320.1.1.1 alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › TFIID_NTD2 0.52 42.0 3.40e-01 91.4% 83.1%
3497992 2484.1.1.72 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF 0.51 42.0 3.36e-01 90.3% 71.1%
4305687 2007.1.2.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF3798 0.50 40.0 3.43e-01 86.0% 53.3%
3481264 7567.1.1.0 a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like 0.50 43.0 3.44e-01 95.7% 85.6%
4158900 7510.1.1.4 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › IDH 0.50 42.0 3.27e-01 90.3% 57.4%