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IMGVR_UViG_3300038426_000200-3300038426-Ga0427943_004830_1571_1852
Arc-VirIMGVR_UViG_3300038426_000200-3300038426-Ga0427943_004830_1571_1852
Identity
- Kingdom:
- archaea
Quality
83.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-80
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.91 | 66.0 | 6.42e-01 | 100.0% | 69.8% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.89 | 64.0 | 7.07e-01 | 100.0% | 92.2% |
| 2vxxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.88 | 64.0 | 4.81e-01 | 98.8% | 34.9% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.88 | 61.0 | 7.03e-01 | 97.5% | 98.3% |
| 4fm3A00 | 1.20.1270.390 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.86 | 60.0 | 5.59e-01 | 95.0% | 60.0% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.85 | 75.0 | 6.68e-01 | 100.0% | 69.2% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 73.0 | 6.32e-01 | 100.0% | 63.2% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.83 | 63.0 | 7.02e-01 | 92.5% | 100.0% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 68.0 | 7.05e-01 | 98.8% | 97.3% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.82 | 65.0 | 6.86e-01 | 92.5% | 94.4% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.81 | 64.0 | 6.84e-01 | 86.3% | 100.0% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.80 | 60.0 | 6.32e-01 | 98.8% | 88.7% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.80 | 67.0 | 6.47e-01 | 100.0% | 80.0% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 64.0 | 6.62e-01 | 100.0% | 92.0% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.79 | 72.0 | 7.01e-01 | 100.0% | 92.0% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.78 | 49.0 | 4.19e-01 | 87.5% | 41.1% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.78 | 72.0 | 4.70e-01 | 100.0% | 57.0% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.78 | 71.0 | 4.68e-01 | 100.0% | 38.8% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.77 | 67.0 | 5.87e-01 | 100.0% | 64.7% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 70.0 | 5.51e-01 | 100.0% | 75.5% |
| 1io1A01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.77 | 70.0 | 5.42e-01 | 100.0% | 98.8% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 58.0 | 5.57e-01 | 97.5% | 70.7% |
| 3zbhA00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.77 | 71.0 | 6.79e-01 | 100.0% | 88.9% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 54.0 | 6.08e-01 | 92.5% | 100.0% |
| 3zciA00 | 1.20.58.1660 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 68.0 | 5.13e-01 | 100.0% | 43.5% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.76 | 63.0 | 5.28e-01 | 100.0% | 53.3% |
| 3ofnY00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.76 | 70.0 | 6.11e-01 | 100.0% | 86.1% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.76 | 67.0 | 4.81e-01 | 100.0% | 61.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.76 | 69.0 | 6.88e-01 | 100.0% | 100.0% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 61.0 | 6.00e-01 | 87.5% | 84.7% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 69.0 | 6.43e-01 | 98.8% | 100.0% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.75 | 63.0 | 5.03e-01 | 97.5% | 46.8% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 66.0 | 5.90e-01 | 100.0% | 70.6% |
| 4biuE01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.74 | 54.0 | 5.09e-01 | 100.0% | 63.3% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.74 | 60.0 | 4.86e-01 | 100.0% | 47.0% |
| 3vkgB06 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.74 | 65.0 | 4.55e-01 | 96.2% | 31.4% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.74 | 65.0 | 4.55e-01 | 100.0% | 36.6% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.73 | 62.0 | 5.61e-01 | 91.3% | 68.2% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 66.0 | 6.42e-01 | 100.0% | 92.0% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 51.0 | 5.78e-01 | 87.5% | 100.0% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.72 | 62.0 | 6.20e-01 | 100.0% | 93.8% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.72 | 61.0 | 5.99e-01 | 96.2% | 85.9% |
| 4q4hA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.72 | 64.0 | 4.24e-01 | 100.0% | 26.4% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.72 | 65.0 | 5.22e-01 | 100.0% | 52.9% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.71 | 61.0 | 4.96e-01 | 92.5% | 53.8% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.71 | 54.0 | 4.87e-01 | 88.7% | 59.8% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 61.0 | 5.63e-01 | 100.0% | 73.8% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.71 | 62.0 | 5.44e-01 | 96.2% | 66.7% |
| 4mycA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.71 | 63.0 | 4.16e-01 | 100.0% | 25.6% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.70 | 62.0 | 4.99e-01 | 100.0% | 52.9% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.69 | 61.0 | 5.42e-01 | 100.0% | 70.9% |
| 3r6nB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 59.0 | 4.34e-01 | 97.5% | 34.8% |
| 3udcA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 57.0 | 5.13e-01 | 92.5% | 64.3% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.69 | 62.0 | 5.75e-01 | 100.0% | 79.2% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.68 | 57.0 | 4.41e-01 | 90.0% | 97.7% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 60.0 | 4.83e-01 | 100.0% | 49.7% |
| 3qc1A01 | 1.25.40.540 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family | 0.68 | 49.0 | 3.96e-01 | 100.0% | 40.4% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.68 | 59.0 | 4.97e-01 | 100.0% | 85.8% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.67 | 55.0 | 4.57e-01 | 95.0% | 49.7% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 59.0 | 4.90e-01 | 100.0% | 92.3% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.67 | 47.0 | 3.84e-01 | 72.5% | 60.4% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 46.0 | 5.07e-01 | 88.7% | 100.0% |
| 3rzeA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 58.0 | 3.94e-01 | 93.8% | 56.0% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 51.0 | 5.46e-01 | 83.7% | 100.0% |
| 4lunU00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 52.0 | 3.48e-01 | 93.8% | 22.2% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 56.0 | 4.81e-01 | 100.0% | 60.4% |
| 3pm6A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 49.0 | 3.34e-01 | 81.2% | 93.0% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.64 | 57.0 | 4.39e-01 | 100.0% | 46.4% |
| 3rh3A01 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.64 | 55.0 | 4.76e-01 | 100.0% | 97.7% |
| 4uiqB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 43.0 | 3.56e-01 | 75.0% | 36.6% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.64 | 54.0 | 4.74e-01 | 100.0% | 61.6% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.64 | 48.0 | 3.43e-01 | 82.5% | 26.7% |
| 3ck6C02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.64 | 55.0 | 4.91e-01 | 100.0% | 66.4% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.63 | 49.0 | 4.69e-01 | 85.0% | 72.6% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 53.0 | 4.85e-01 | 91.3% | 73.8% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 55.0 | 5.53e-01 | 97.5% | 100.0% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.60 | 47.0 | 4.07e-01 | 95.0% | 54.3% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 42.0 | 3.53e-01 | 75.0% | 42.4% |
| 3wurA00 | 1.20.1420.60 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › | 0.55 | 43.0 | 3.48e-01 | 93.8% | 42.6% |
| 4cp8E00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.50 | 44.0 | 2.75e-01 | 98.8% | 17.6% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4821107 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.86 | 76.0 | 4.93e-01 | 100.0% | 23.7% |
| 3701429 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.84 | 79.0 | 5.85e-01 | 100.0% | 51.9% |
| 4951992 | 5041.1.1.55 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › DUF1622 | 0.84 | 71.0 | 6.58e-01 | 95.0% | 73.0% |
| 5021813 | 5058.1.1.101 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › DUF1622 | 0.83 | 72.0 | 6.47e-01 | 96.2% | 70.5% |
| 2391543 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.82 | 75.0 | 5.50e-01 | 100.0% | 40.1% |
| 5036796 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.81 | 71.0 | 5.84e-01 | 98.8% | 54.3% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.81 | 67.0 | 6.75e-01 | 100.0% | 87.5% |
| 5033072 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.81 | 64.0 | 5.45e-01 | 83.7% | 57.7% |
| 3266510 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.80 | 74.0 | 5.99e-01 | 100.0% | 55.9% |
| 3279027 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.80 | 73.0 | 5.61e-01 | 100.0% | 46.3% |
| 3283355 | 150.5.1.51 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100_2 | 0.80 | 72.0 | 7.07e-01 | 97.5% | 96.5% |
| 3287601 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.79 | 73.0 | 6.91e-01 | 100.0% | 85.1% |
| 3961347 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.79 | 67.0 | 6.55e-01 | 91.3% | 84.7% |
| 4038742 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.79 | 71.0 | 6.67e-01 | 97.5% | 81.1% |
| 4300676 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.79 | 67.0 | 6.01e-01 | 100.0% | 67.3% |
| 4928060 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.78 | 61.0 | 5.45e-01 | 82.5% | 64.2% |
| 3935140 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.78 | 71.0 | 5.41e-01 | 100.0% | 73.9% |
| 3270696 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.78 | 69.0 | 6.27e-01 | 100.0% | 74.3% |
| 3957973 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.78 | 70.0 | 6.52e-01 | 100.0% | 80.8% |
| 3984078 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.78 | 72.0 | 4.76e-01 | 100.0% | 27.5% |
| 3935107 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.78 | 68.0 | 6.06e-01 | 100.0% | 69.1% |
| 3492486 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.78 | 69.0 | 4.86e-01 | 100.0% | 33.5% |
| 3957966 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.77 | 72.0 | 6.30e-01 | 100.0% | 69.6% |
| 3279024 | 150.5.1.51 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100_2 | 0.77 | 71.0 | 5.95e-01 | 100.0% | 63.8% |
| 3612941 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 68.0 | 5.59e-01 | 100.0% | 55.0% |
| 3185197 | 192.5.1.17 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF202 | 0.77 | 64.0 | 5.36e-01 | 90.0% | 57.0% |
| 3622487 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.77 | 69.0 | 6.16e-01 | 100.0% | 70.9% |
| 4329615 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.77 | 60.0 | 6.37e-01 | 98.8% | 95.7% |
| 3962961 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.77 | 71.0 | 7.18e-01 | 98.8% | 98.8% |
| 3486722 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.77 | 69.0 | 5.36e-01 | 100.0% | 48.2% |
| 5065235 | 101.1.2.738 ↗ | alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C | 0.76 | 71.0 | 5.28e-01 | 100.0% | 43.8% |
| 3927012 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.76 | 67.0 | 5.52e-01 | 100.0% | 55.0% |
| 56798 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.76 | 64.0 | 6.54e-01 | 91.3% | 100.0% |
| 3169381 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.76 | 70.0 | 5.07e-01 | 100.0% | 67.3% |
| 3589462 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 69.0 | 5.11e-01 | 100.0% | 48.7% |
| 3968183 | 3758.2.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB | 0.76 | 69.0 | 5.45e-01 | 100.0% | 62.0% |
| 3613914 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.76 | 60.0 | 6.17e-01 | 100.0% | 92.0% |
| 3973636 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 65.0 | 6.75e-01 | 96.2% | 100.0% |
| 3389783 | 5030.1.1.0 ↗ | extended segments › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL | 0.75 | 65.0 | 5.88e-01 | 100.0% | 70.5% |
| 4806319 | 3755.1.1.2 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO-like | 0.75 | 58.0 | 5.77e-01 | 100.0% | 79.5% |
| 3954313 | 150.5.1.52 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE | 0.75 | 68.0 | 6.45e-01 | 100.0% | 87.4% |
| 4780326 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.75 | 67.0 | 5.05e-01 | 100.0% | 85.4% |
| 3169475 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.75 | 68.0 | 5.88e-01 | 100.0% | 70.0% |
| 3289188 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.74 | 67.0 | 4.32e-01 | 98.8% | 35.7% |
| 3470751 | 3755.3.1.297 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 | 0.74 | 68.0 | 5.36e-01 | 100.0% | 50.6% |
| 3785816 | 4.1.1.369 ↗ | beta barrels › SH3 › SH3 › SH3 › Not3 | 0.74 | 65.0 | 5.26e-01 | 92.5% | 55.0% |
| 3202568 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.74 | 67.0 | 5.07e-01 | 100.0% | 47.0% |
| 4601944 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.74 | 64.0 | 6.62e-01 | 93.8% | 100.0% |
| 3981585 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.74 | 63.0 | 6.54e-01 | 95.0% | 100.0% |
| 3814372 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.74 | 64.0 | 5.89e-01 | 97.5% | 74.3% |
| 4009520 | 1.1.7.98 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25876 | 0.73 | 63.0 | 6.50e-01 | 96.2% | 100.0% |
| 4174593 | 3922.1.1.248 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF25876 | 0.73 | 63.0 | 6.47e-01 | 93.8% | 100.0% |
| 3960783 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.73 | 63.0 | 6.36e-01 | 95.0% | 93.8% |
| 3848799 | 3755.2.1.4 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein › PF26143 | 0.73 | 62.0 | 5.28e-01 | 100.0% | 57.0% |
| 3574609 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.73 | 65.0 | 4.91e-01 | 100.0% | 91.6% |
| 3963355 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.72 | 61.0 | 6.28e-01 | 95.0% | 97.3% |
| 4237056 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.72 | 66.0 | 5.41e-01 | 100.0% | 58.6% |
| 3969814 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.72 | 61.0 | 6.34e-01 | 93.8% | 100.0% |
| 4972577 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.72 | 66.0 | 4.50e-01 | 100.0% | 31.3% |
| 3391384 | 5030.1.1.0 ↗ | extended segments › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL › Photosystem II reaction center protein L, PsbL | 0.72 | 66.0 | 6.47e-01 | 97.5% | 100.0% |
| 3974231 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.72 | 57.0 | 5.97e-01 | 96.2% | 100.0% |
| 5040843 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.71 | 57.0 | 5.42e-01 | 86.3% | 72.6% |
| 3610233 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.71 | 60.0 | 5.20e-01 | 95.0% | 64.0% |
| 3529736 | 3755.3.1.316 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › ATRX_C | 0.71 | 63.0 | 5.36e-01 | 100.0% | 70.0% |
| 3787103 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.71 | 62.0 | 5.21e-01 | 100.0% | 57.9% |
| 3589614 | 601.1.2.99 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DAGK_prokar | 0.71 | 59.0 | 5.18e-01 | 95.0% | 63.4% |
| 3788609 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.70 | 59.0 | 5.36e-01 | 93.8% | 69.1% |
| 3495261 | 109.4.1.1844 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_10, TPR_12 | 0.70 | 61.0 | 3.86e-01 | 100.0% | 18.6% |
| 3989648 | 1203.1.2.17 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ABC_membrane | 0.69 | 60.0 | 4.56e-01 | 100.0% | 40.5% |
| 4270843 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.69 | 55.0 | 4.46e-01 | 100.0% | 45.2% |
| 3969543 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.69 | 58.0 | 5.99e-01 | 93.8% | 100.0% |
| 1276361 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.68 | 61.0 | 5.39e-01 | 98.8% | 68.1% |
| 5049284 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.68 | 60.0 | 5.25e-01 | 100.0% | 79.2% |
| 3413926 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.67 | 59.0 | 4.13e-01 | 100.0% | 30.2% |
| 3537261 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 58.0 | 4.02e-01 | 100.0% | 28.9% |
| 3402390 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.66 | 59.0 | 4.99e-01 | 100.0% | 99.3% |
| 3973749 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.66 | 55.0 | 4.12e-01 | 92.5% | 66.3% |
| 5045310 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.66 | 51.0 | 5.44e-01 | 85.0% | 97.1% |
| 3901911 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.66 | 58.0 | 4.77e-01 | 100.0% | 89.3% |
| 3264568 | 3748.1.1.3 ↗ | extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C | 0.65 | 57.0 | 5.25e-01 | 100.0% | 77.1% |
| 3641196 | 5041.1.1.27 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › PRA1 | 0.64 | 46.0 | 4.09e-01 | 75.0% | 55.7% |
| 4444553 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.63 | 55.0 | 3.67e-01 | 97.5% | 41.8% |