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IMGVR_UViG_3300038433_001056-3300038433-Ga0394425_01149_1_546

Arc-Vir

IMGVR_UViG_3300038433_001056-3300038433-Ga0394425_01149_1_546

Quality

92.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-83_135-153
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qq6A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.76 70.0 5.10e-01 100.0% 43.4%
1rqeA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.76 69.0 4.98e-01 100.0% 60.9%
1i4nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.75 69.0 5.11e-01 100.0% 44.2%
3ugvA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.75 68.0 5.14e-01 100.0% 46.6%
2podA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.75 68.0 5.02e-01 100.0% 45.0%
2pgeA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 67.0 5.14e-01 100.0% 62.4%
3go2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 67.0 4.90e-01 100.0% 52.2%
3cjpA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.74 66.0 4.92e-01 100.0% 62.2%
2o55A00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.74 67.0 4.96e-01 100.0% 44.1%
2oztA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.74 66.0 5.30e-01 100.0% 59.1%
2i5gA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.74 66.0 4.62e-01 100.0% 50.8%
2ps2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.72 65.0 4.95e-01 100.0% 49.2%
2pcqA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 64.0 4.65e-01 100.0% 74.1%
5az0A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.71 64.0 4.48e-01 100.0% 56.5%
2bmbA02 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.70 63.0 4.45e-01 100.0% 55.6%
5lx1A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.70 62.0 4.24e-01 100.0% 59.7%
3mt1B02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.70 63.0 4.98e-01 100.0% 60.7%
3s5nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 63.0 4.51e-01 100.0% 62.0%
1a80A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.69 61.0 4.52e-01 100.0% 45.5%
1t71A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.69 61.0 4.42e-01 98.0% 59.1%
4ijrA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.69 61.0 4.30e-01 100.0% 48.5%
4gxwB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.68 60.0 4.17e-01 100.0% 53.6%
4eukA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 49.0 4.45e-01 76.5% 89.0%
3lu2A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.67 60.0 4.26e-01 100.0% 61.8%
3jteA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 50.0 4.73e-01 80.4% 83.3%
5tqjA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 46.0 4.36e-01 74.5% 84.7%
4m7tA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 57.0 4.29e-01 98.0% 98.8%
1reqA02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.63 57.0 4.84e-01 100.0% 76.2%
4rk5A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 44.0 4.04e-01 94.1% 58.6%
2vsqA03 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 53.0 4.36e-01 100.0% 77.4%
2v0nA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.65e-01 97.1% 74.7%
5bseA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 51.0 4.25e-01 96.1% 76.3%
1dinA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 50.0 3.92e-01 100.0% 82.8%
3g7sA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.57 50.0 3.37e-01 100.0% 71.1%
4ixoA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 49.0 3.74e-01 95.1% 52.1%
4gx0B04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 47.0 4.37e-01 93.1% 80.2%
4xfkA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 47.0 4.03e-01 96.1% 82.4%
3mw8A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 46.0 4.47e-01 92.2% 94.9%
3c2qA02 3.40.50.10690 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › putative lor/sdh protein like domains 0.55 47.0 3.63e-01 95.1% 86.3%
2n3zA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 39.0 4.04e-01 74.5% 97.0%
3gbvA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 47.0 4.15e-01 94.1% 83.9%
3bmxA02 3.40.50.1700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain 0.55 45.0 3.58e-01 91.2% 85.7%
4hujA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 3.91e-01 100.0% 85.3%
4pyrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 46.0 4.43e-01 94.1% 89.2%
4krgA02 3.40.50.12180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 46.0 3.70e-01 95.1% 84.9%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.53 36.0 3.60e-01 95.1% 67.0%
4ilkA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 44.0 4.02e-01 100.0% 68.7%
3mgkB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 46.0 3.74e-01 100.0% 93.5%
4ycsA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 45.0 4.27e-01 96.1% 86.2%
3nuqA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 42.0 3.60e-01 89.2% 89.3%
4rlqA01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 44.0 3.38e-01 95.1% 43.6%
8k5lA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 44.0 3.64e-01 99.0% 87.4%
2i76A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 42.0 3.76e-01 90.2% 65.0%
2gpyB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 43.0 3.55e-01 96.1% 67.7%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5051291 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.88 83.0 5.43e-01 100.0% 41.9%
4939266 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.86 81.0 5.43e-01 100.0% 57.5%
4643351 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.85 80.0 5.51e-01 100.0% 47.7%
3839446 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.84 79.0 5.38e-01 100.0% 51.7%
4008556 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.84 79.0 5.63e-01 100.0% 45.2%
5019881 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.84 78.0 4.69e-01 100.0% 26.0%
5001726 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.83 77.0 5.24e-01 100.0% 44.8%
3966827 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.81 75.0 5.13e-01 100.0% 57.0%
4950483 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.81 74.0 5.31e-01 100.0% 54.2%
3588780 2002.1.1.52 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 0.80 74.0 5.16e-01 100.0% 54.1%
5049645 2002.1.1.106 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.77 71.0 5.27e-01 100.0% 45.7%
None 0.75 69.0 5.15e-01 100.0% 44.0%
4220345 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.74 64.0 4.60e-01 97.1% 51.1%
3190312 2002.1.1.97 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI 0.72 65.0 4.79e-01 100.0% 53.1%
165722 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.71 62.0 4.48e-01 95.1% 54.8%
4213665 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.71 53.0 4.77e-01 78.4% 72.1%
3431875 2002.1.1.10 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS 0.71 64.0 4.46e-01 100.0% 47.0%
5079271 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.71 64.0 4.60e-01 100.0% 55.2%
4973929 2002.1.1.224 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM 0.69 61.0 4.59e-01 100.0% 53.5%
4092080 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.66 56.0 4.90e-01 99.0% 61.9%
3996187 7512.1.1.54 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 0.63 47.0 4.34e-01 80.4% 60.7%
5009258 2007.24.1.1 a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like › ATP-synt_F 0.62 42.0 4.25e-01 70.6% 93.3%
3474699 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.61 49.0 3.77e-01 89.2% 89.4%
3479749 2490.1.1.0 a/b three-layered sandwiches › Ribosomal protein L13/L15p/L18e/L32e › Ribosomal protein L32e › Ribosomal protein L32e 0.59 40.0 3.70e-01 91.2% 53.0%
5017458 2003.1.1.311 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Fibrillarin_2 0.58 38.0 3.91e-01 85.3% 68.0%
2073550 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.58 49.0 4.13e-01 95.1% 90.2%
4931345 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.58 48.0 4.30e-01 92.2% 68.0%
5007670 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.58 49.0 3.68e-01 95.1% 43.1%
4203031 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 51.0 4.33e-01 99.0% 69.7%
2605339 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 48.0 4.13e-01 95.1% 62.1%
3994159 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 49.0 3.70e-01 99.0% 44.5%
3286968 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 49.0 3.69e-01 99.0% 51.5%
4939525 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.55 42.0 3.99e-01 100.0% 67.5%
4937640 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.55 46.0 4.10e-01 93.1% 70.0%
4979003 7584.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.55 48.0 4.05e-01 96.1% 66.5%
2075061 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.55 41.0 4.50e-01 96.1% 98.8%
5009519 7584.1.1.1 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.55 46.0 3.88e-01 95.1% 62.8%
1758184 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.54 46.0 4.41e-01 93.1% 90.6%
4626495 7516.1.1.24 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.54 40.0 2.86e-01 76.5% 70.5%
4992758 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.54 49.0 3.73e-01 98.0% 73.3%
4938190 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.54 45.0 4.02e-01 93.1% 73.3%
4491673 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.53 45.0 3.83e-01 95.1% 75.4%
4054980 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.53 45.0 3.75e-01 95.1% 73.9%
3989786 2010.1.1.4 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › FakA-like_C 0.52 41.0 3.94e-01 88.2% 96.8%
4187385 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.51 43.0 3.58e-01 95.1% 68.2%
4023458 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.51 43.0 3.64e-01 94.1% 72.8%
5016403 7523.1.1.6 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Porphobil_deam 0.51 36.0 3.75e-01 96.1% 80.0%
134642 2003.1.1.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.51 42.0 3.60e-01 95.1% 72.8%
4928120 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.51 37.0 3.58e-01 91.2% 67.8%
3600545 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.51 46.0 3.68e-01 99.0% 65.6%
4125650 2003.1.1.70 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N_2 0.51 43.0 3.61e-01 95.1% 73.9%
3248904 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.50 43.0 3.57e-01 97.1% 81.0%
D2 medium residues 84-134_154-175
PDB
Domain cluster: representative