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IMGVR_UViG_3300038673_000600-3300038673-Ga0416707_004519_8071_8697

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300038673_000600-3300038673-Ga0416707_004519_8071_8697 ↗
Kingdom:: archaea

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-113

PDB

Domain cluster: representative

D2 high residues 117-206

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6a95A01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.76	39.0	3.45e-01	84.4%	35.7%
3teqB00	1.10.287.3550	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.72	49.0	4.72e-01	76.7%	62.4%
3nyjA00	1.20.120.770	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain	0.68	58.0	4.54e-01	100.0%	45.3%
4qgpB00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.65	35.0	3.33e-01	77.8%	43.0%
1cpcA00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.57	42.0	3.39e-01	75.6%	56.2%
5zr4A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.53	37.0	3.55e-01	71.1%	69.6%
3mhsB00	1.10.246.140	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1	0.52	34.0	3.44e-01	72.2%	65.9%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5012473	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.91	56.0	5.12e-01	84.4%	50.9%
3709425	601.19.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein	0.78	59.0	4.59e-01	78.9%	99.5%
5079456	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.78	63.0	4.88e-01	84.4%	60.6%
4018084	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.77	39.0	4.44e-01	83.3%	64.3%
3506566	109.4.1.1467 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG3_N, COG3_C, PF31184	0.72	58.0	3.49e-01	84.4%	13.5%
4195555	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.67	57.0	4.54e-01	93.3%	61.1%
3264100	5054.1.1.59 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2	0.67	56.0	4.00e-01	87.8%	74.5%
3823703	212.1.1.22 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans	0.67	52.0	3.71e-01	81.1%	78.8%
5054388	4163.1.1.1 ↗	alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5	0.66	48.0	4.05e-01	85.6%	47.9%
4297683	2003.1.2.15 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3	0.63	44.0	2.85e-01	73.3%	16.8%
3235519	109.4.1.470 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › INTS2	0.58	49.0	2.80e-01	93.3%	10.7%
4888386	1116.1.1.0 ↗	a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain	0.56	39.0	3.38e-01	80.0%	46.4%