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IMGVR_UViG_3300038675_000995-3300038675-Ga0416708_003788_8092_8652

Arc-Vir

IMGVR_UViG_3300038675_000995-3300038675-Ga0416708_003788_8092_8652

Identity

Kingdom:
archaea

Quality

91.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-118
PDB
Domain cluster: rep: MG209611.1__ATW59403.1__Cl131_gp135__00135__D76-159
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF28055.1 best VVA0879 42.3 8.20e-11 83.8% 89.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6rxpA02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.56 32.0 3.57e-01 98.3% 70.5%
5hkxA04 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.55 24.0 3.34e-01 79.5% 97.7%
1yc5A02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.52 31.0 3.55e-01 98.3% 81.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041978 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 28.0 4.23e-01 80.3% 100.0%
3245214 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.61 31.0 3.64e-01 82.9% 68.2%
3772067 376.1.1.23 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.57 26.0 3.34e-01 77.8% 71.4%
3806101 376.1.1.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 0.57 26.0 3.44e-01 77.8% 81.7%
3246456 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.55 28.0 3.46e-01 84.6% 78.6%
3414074 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.55 22.0 3.21e-01 75.2% 84.0%
4946420 376.1.1.180 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII 0.55 27.0 3.36e-01 85.5% 80.0%
3221156 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.54 22.0 3.00e-01 77.8% 72.7%
3245310 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.54 30.0 3.54e-01 83.8% 80.0%
3878373 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.54 26.0 3.24e-01 83.8% 74.3%
3236339 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.54 31.0 3.69e-01 83.8% 87.8%
3196969 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.53 27.0 3.25e-01 84.6% 75.7%
3993660 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.53 31.0 3.57e-01 85.5% 80.0%
3990567 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.53 24.0 3.20e-01 81.2% 81.7%
5071881 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.52 24.0 3.02e-01 79.5% 75.0%
4004083 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.51 26.0 2.79e-01 77.8% 53.4%
1247294 375.1.1.18 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 0.51 23.0 3.17e-01 82.1% 97.9%
D2 high residues 122-181
PDB
Domain cluster: rep: IMGVR_UViG_3300005573_001597-3300005573-Ga0078972_1000005899__D3-62
CATH (92)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.79 59.0 3.50e-01 78.3% 96.6%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.79 59.0 4.29e-01 78.3% 91.9%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 58.0 3.81e-01 78.3% 86.5%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 55.0 3.93e-01 75.0% 61.3%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.77 57.0 3.39e-01 78.3% 76.2%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.76 56.0 3.62e-01 78.3% 82.2%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.75 50.0 4.68e-01 71.7% 55.3%
1vqwA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 55.0 3.40e-01 78.3% 70.9%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.74 54.0 3.25e-01 76.7% 79.9%
2r6uA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.73 51.0 4.03e-01 73.3% 37.7%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.71 59.0 4.53e-01 88.3% 99.2%
3g8yA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.70 50.0 3.03e-01 76.7% 39.9%
5je6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 60.0 3.95e-01 95.0% 38.6%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 56.0 4.40e-01 88.3% 99.2%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 53.0 5.74e-01 81.7% 100.0%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 57.0 4.44e-01 88.3% 99.2%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.69 51.0 4.98e-01 80.0% 74.6%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 50.0 3.41e-01 78.3% 94.0%
3rr1A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.68 50.0 3.90e-01 80.0% 62.8%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 48.0 3.10e-01 75.0% 83.3%
3g12B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.68 45.0 3.70e-01 70.0% 37.2%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.67 55.0 3.79e-01 93.3% 50.2%
1j6uA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.67 55.0 3.83e-01 93.3% 47.4%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.67 46.0 3.53e-01 71.7% 70.1%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 48.0 4.02e-01 76.7% 60.8%
4uv3E01 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.66 55.0 3.95e-01 100.0% 61.1%
3t8qB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.66 49.0 4.00e-01 80.0% 77.4%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.66 54.0 3.69e-01 95.0% 31.2%
2ovrB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 46.0 2.90e-01 75.0% 25.4%
3bexA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 46.0 3.59e-01 76.7% 36.0%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.65 48.0 3.69e-01 81.7% 83.2%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.64 49.0 3.70e-01 81.7% 89.6%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.64 47.0 3.67e-01 80.0% 63.1%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.64 45.0 3.96e-01 80.0% 49.5%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 43.0 3.58e-01 70.0% 41.8%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 50.0 4.03e-01 88.3% 99.2%
1yguA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.63 53.0 3.34e-01 90.0% 30.1%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 46.0 4.15e-01 80.0% 69.8%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 54.0 3.47e-01 98.3% 34.2%
1fgsA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 50.0 3.31e-01 93.3% 34.9%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 53.0 4.27e-01 95.0% 65.5%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 4.28e-01 98.3% 89.2%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 49.0 4.79e-01 88.3% 79.1%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.61 46.0 3.64e-01 81.7% 88.4%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 52.0 4.94e-01 93.3% 85.9%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.61 49.0 3.26e-01 90.0% 36.5%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.61 47.0 4.53e-01 85.0% 77.5%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 53.0 3.35e-01 100.0% 26.6%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.61 49.0 4.09e-01 91.7% 91.8%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.61 54.0 3.63e-01 100.0% 79.2%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.61 50.0 3.73e-01 98.3% 85.8%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.60 50.0 4.87e-01 98.3% 97.1%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 51.0 4.13e-01 98.3% 94.3%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.60 50.0 4.95e-01 98.3% 90.9%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 53.0 3.14e-01 98.3% 40.8%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 44.0 3.17e-01 80.0% 63.3%
5eoxB03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 42.0 3.44e-01 78.3% 68.8%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.60 50.0 3.56e-01 95.0% 39.0%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.59 42.0 3.55e-01 73.3% 49.5%
3k7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 3.98e-01 91.7% 100.0%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.59 51.0 3.28e-01 95.0% 31.7%
2eefA01 2.60.40.2440 Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain 0.59 52.0 4.08e-01 100.0% 80.3%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.59 50.0 3.86e-01 96.7% 80.7%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.59 47.0 4.16e-01 90.0% 79.8%
3ktaA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 40.0 2.96e-01 71.7% 65.9%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 49.0 3.96e-01 96.7% 87.6%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 40.0 2.97e-01 71.7% 60.8%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.58 48.0 4.26e-01 96.7% 90.4%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 48.0 4.04e-01 100.0% 71.9%
3rheA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 39.0 3.25e-01 71.7% 37.7%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 51.0 4.84e-01 98.3% 97.2%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 50.0 3.83e-01 100.0% 85.1%
1zswA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 45.0 3.33e-01 91.7% 30.9%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.57 46.0 3.30e-01 96.7% 92.2%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 4.36e-01 100.0% 90.5%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.56 45.0 4.66e-01 86.7% 92.9%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.56 43.0 3.73e-01 83.3% 69.1%
3lbeB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 41.0 3.36e-01 81.7% 95.2%
1uv7A00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.56 41.0 3.90e-01 81.7% 94.7%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 4.12e-01 98.3% 96.7%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.29e-01 100.0% 75.1%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 46.0 3.52e-01 96.7% 41.7%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.56 43.0 4.29e-01 86.7% 79.7%
1n02A00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 42.0 3.61e-01 85.0% 63.7%
3wwxA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 45.0 2.92e-01 100.0% 20.0%
3h74A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.55 46.0 3.06e-01 100.0% 91.4%
4huzA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 2.87e-01 73.3% 27.7%
2a6hC03 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.54 35.0 2.59e-01 70.0% 22.2%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.54 44.0 3.89e-01 95.0% 71.3%
2r5vA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 44.0 3.37e-01 93.3% 39.3%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.60e-01 88.3% 80.4%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.00e-01 100.0% 71.1%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4017268 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.82 58.0 3.66e-01 73.3% 72.4%
3734678 2003.1.2.48 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding-like 0.81 58.0 3.40e-01 75.0% 75.8%
4015135 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.81 58.0 3.63e-01 75.0% 66.7%
5013324 2003.1.3.10 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_oxidored 0.80 59.0 3.81e-01 78.3% 74.2%
None — 0.79 59.0 3.43e-01 78.3% 91.9%
None — 0.79 59.0 3.42e-01 78.3% 92.8%
4264310 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.79 59.0 3.40e-01 78.3% 89.8%
None — 0.79 58.0 3.40e-01 78.3% 91.7%
3732796 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.78 58.0 3.39e-01 78.3% 72.4%
None — 0.78 58.0 3.46e-01 78.3% 90.6%
4486447 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.77 57.0 3.32e-01 78.3% 61.4%
4009208 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.77 57.0 3.40e-01 78.3% 73.2%
4116579 2003.1.2.99 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 0.77 57.0 3.37e-01 78.3% 70.6%
2801566 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.77 57.0 3.47e-01 78.3% 88.8%
None — 0.76 58.0 3.56e-01 80.0% 81.0%
4016874 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.76 56.0 3.52e-01 78.3% 64.8%
3733247 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.76 56.0 3.63e-01 78.3% 72.2%
3693633 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.76 58.0 3.56e-01 80.0% 52.1%
5011793 2003.1.3.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 0.76 56.0 3.82e-01 78.3% 86.0%
2698243 2003.1.2.30 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.76 57.0 4.30e-01 80.0% 89.6%
2773986 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.76 56.0 3.29e-01 78.3% 73.0%
4547176 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.76 56.0 3.30e-01 78.3% 95.9%
3737179 2003.1.2.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.76 56.0 3.43e-01 78.3% 71.3%
3966428 2003.1.2.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.75 55.0 3.48e-01 78.3% 74.8%
4021287 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.75 55.0 3.47e-01 78.3% 66.9%
3991419 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.74 55.0 3.22e-01 78.3% 94.3%
3737837 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 6.15e-01 91.7% 95.4%
4013024 5.1.4.249 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 0.74 53.0 3.10e-01 75.0% 24.0%
3733607 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.74 57.0 3.33e-01 83.3% 71.7%
4932227 512.1.1.2 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.74 60.0 4.21e-01 100.0% 28.4%
1527536 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.74 56.0 3.93e-01 80.0% 88.4%
3725179 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.74 58.0 3.38e-01 83.3% 74.2%
4581431 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.73 59.0 3.59e-01 86.7% 34.2%
5044389 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.73 49.0 5.30e-01 73.3% 84.0%
5047716 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.73 54.0 3.73e-01 78.3% 87.7%
4389714 2003.1.2.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.73 59.0 4.04e-01 86.7% 64.7%
2433655 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.73 54.0 3.53e-01 80.0% 89.0%
3737927 220.1.1.294 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.72 55.0 4.48e-01 81.7% 71.8%
None — 0.72 49.0 3.20e-01 71.7% 43.5%
5081654 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.71 54.0 5.48e-01 96.7% 81.7%
4967263 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 56.0 4.50e-01 91.7% 45.5%
5069281 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.71 58.0 4.41e-01 88.3% 95.6%
4190716 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.71 52.0 4.12e-01 80.0% 40.0%
4937504 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.71 58.0 4.04e-01 88.3% 65.9%
5045242 2003.1.3.75 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_2 0.71 52.0 3.62e-01 78.3% 88.2%
4946613 512.1.1.5 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.71 61.0 4.26e-01 100.0% 29.5%
4289288 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.71 61.0 4.86e-01 100.0% 56.2%
4983389 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.71 53.0 5.16e-01 80.0% 76.9%
4952310 2003.1.3.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.71 54.0 3.72e-01 83.3% 93.2%
419 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.70 53.0 4.88e-01 80.0% 65.8%
5041239 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.70 57.0 3.95e-01 88.3% 64.2%
3942848 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.70 56.0 3.83e-01 88.3% 98.6%
1513837 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 54.0 5.44e-01 83.3% 85.0%
None — 0.69 53.0 3.67e-01 83.3% 88.0%
3280521 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.69 52.0 3.49e-01 81.7% 79.6%
4055494 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.69 48.0 4.87e-01 73.3% 75.0%
4944505 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.68 51.0 4.01e-01 78.3% 42.5%
3166879 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 59.0 5.74e-01 95.0% 95.4%
3929340 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 55.0 4.13e-01 88.3% 97.2%
4421601 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 55.0 3.92e-01 88.3% 62.3%
4985958 2003.1.2.29 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.68 52.0 3.66e-01 83.3% 91.6%
5030954 2003.1.3.10 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_oxidored 0.68 53.0 3.27e-01 83.3% 49.1%
4971739 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.68 52.0 3.22e-01 83.3% 93.8%
4537528 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.58e-01 95.0% 95.7%
4998304 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.68 54.0 3.19e-01 86.7% 32.1%
4998305 2003.1.3.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.68 52.0 3.61e-01 83.3% 86.0%
4991370 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.68 55.0 4.29e-01 88.3% 98.4%
5050497 2003.1.3.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.68 52.0 2.89e-01 83.3% 37.9%
3482713 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 48.0 3.73e-01 76.7% 55.6%
3638604 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.67 55.0 4.19e-01 88.3% 95.6%
4927967 2003.1.2.297 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_dim 0.67 54.0 3.25e-01 88.3% 24.4%
3636503 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 59.0 5.64e-01 100.0% 92.9%
4431607 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.66 49.0 4.18e-01 80.0% 88.0%
5035008 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.66 53.0 3.84e-01 88.3% 87.3%
4443040 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.66 56.0 4.58e-01 91.7% 56.7%
9275 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.65 49.0 3.60e-01 80.0% 90.3%
5003221 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.65 54.0 4.57e-01 100.0% 91.3%
4953814 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 53.0 5.33e-01 100.0% 95.0%
3979396 3454.1.1.4 ↗ beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › HofP 0.65 50.0 4.51e-01 81.7% 80.0%
3967128 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.65 55.0 5.19e-01 91.7% 81.4%
4606688 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.65 55.0 5.07e-01 91.7% 84.0%
3687350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.93e-01 78.3% 90.9%
4991274 218.4.1.1 ↗ a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.64 50.0 4.38e-01 86.7% 82.1%
4049072 2.4.1.6 ↗ beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.64 53.0 4.31e-01 91.7% 53.6%
3975862 220.1.1.104 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.63 50.0 4.56e-01 86.7% 83.7%
5015089 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 55.0 3.70e-01 100.0% 42.9%
4016041 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 52.0 3.41e-01 95.0% 33.7%
4235194 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.63 50.0 3.91e-01 86.7% 42.4%
3980136 243.3.1.21 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YsaB 0.62 54.0 5.03e-01 98.3% 82.7%
4991490 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 51.0 4.98e-01 98.3% 83.1%
368907 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.62 48.0 3.91e-01 86.7% 98.3%
5051943 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.61 49.0 3.38e-01 95.0% 29.6%
3970949 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 46.0 3.79e-01 86.7% 43.5%
4505316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 5.11e-01 95.0% 93.3%
4375243 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.58 40.0 3.50e-01 75.0% 43.8%
3502939 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.58 45.0 4.12e-01 93.3% 68.9%
4404873 5.1.3.20 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 0.56 46.0 2.92e-01 100.0% 23.6%
4241924 4.1.1.93 ↗ beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.56 49.0 4.27e-01 96.7% 74.4%
3209968 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 45.0 2.84e-01 96.7% 21.0%