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IMGVR_UViG_3300038731_000004-3300038731-Ga0188182_0385_87_965
Arc-VirIMGVR_UViG_3300038731_000004-3300038731-Ga0188182_0385_87_965
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-224
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09567.16 best | RE_MamI | 213.4 | 3.80e-63 | 91.5% | 90.0% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ayjA00 | 4.10.1060.50 | Few Secondary Structures › Irregular › ZNF265 like › | 0.77 | 20.0 | 4.21e-01 | 85.4% | 89.3% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.54 | 36.0 | 3.76e-01 | 70.8% | 71.6% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.52 | 15.0 | 2.89e-01 | 78.8% | 100.0% |
| 2hqsA01 | 3.40.50.10070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain | 0.51 | 32.0 | 3.76e-01 | 100.0% | 90.1% |
| 5cw3C01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 34.0 | 3.94e-01 | 100.0% | 95.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927062 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 16.0 | 4.12e-01 | 72.2% | 91.1% |
| 4522823 | 2008.1.1.194 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_MamI | 0.78 | 73.0 | 6.93e-01 | 100.0% | 84.5% |
| 5047644 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 16.0 | 4.08e-01 | 72.6% | 91.1% |
| 3606640 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 30.0 | 4.09e-01 | 100.0% | 88.2% |
| 4046488 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.59 | 27.0 | 3.60e-01 | 84.9% | 80.0% |
| 4626114 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.57 | 28.0 | 3.58e-01 | 84.4% | 80.9% |
| 4262608 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.56 | 28.0 | 3.76e-01 | 94.3% | 90.0% |
| 4193792 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.55 | 26.0 | 3.40e-01 | 82.5% | 80.0% |
| 4545906 | 7503.1.1.3 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N | 0.54 | 29.0 | 3.41e-01 | 93.9% | 74.3% |
| 5080980 | 330.2.1.1 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › Ribosomal_S30AE | 0.50 | 21.0 | 2.89e-01 | 93.9% | 71.8% |
| 3206409 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 35.0 | 3.92e-01 | 96.2% | 91.3% |
D2
medium
residues 234-267
Domain cluster:
representative