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IMGVR_UViG_3300038805_000234-3300038805-Ga0239563_019355_4215_4931
Arc-VirIMGVR_UViG_3300038805_000234-3300038805-Ga0239563_019355_4215_4931
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 151-232
Domain cluster:
rep: IMGVR_UViG_3300033781_000034-3300033781-Ga0326759_00004_125332_128028__D740-834
D2
medium
residues 1-94
Domain cluster:
rep: putative_D5_family_NTPase_ATPase__YP_031600__Frog_virus_3__10493__D723-807
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19263.6 best | DUF5906 | 35.4 | 2.10e-08 | 85.1% | 65.5% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tueD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 66.0 | 5.13e-01 | 100.0% | 46.0% |
| 1svmA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 65.0 | 5.49e-01 | 98.9% | 65.4% |
| 4zpxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 54.0 | 4.03e-01 | 88.3% | 45.9% |
| 3nbxX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 55.0 | 4.29e-01 | 100.0% | 47.4% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 54.0 | 4.34e-01 | 100.0% | 59.8% |
| 3vkhA08 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 3.55e-01 | 98.9% | 33.6% |
| 1gg1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 51.0 | 3.57e-01 | 100.0% | 50.1% |
| 1js1X02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.56 | 40.0 | 3.51e-01 | 89.4% | 48.0% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.55 | 47.0 | 3.17e-01 | 100.0% | 27.5% |
| 4h3sA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 40.0 | 2.72e-01 | 76.6% | 47.3% |
| 3wl5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 3.06e-01 | 89.4% | 84.0% |
| 7o0aD01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 36.0 | 2.82e-01 | 72.3% | 36.1% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.52 | 45.0 | 3.79e-01 | 100.0% | 91.7% |
| 4fqdB02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.51 | 43.0 | 3.34e-01 | 93.6% | 55.1% |
| 3ktyA01 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.51 | 34.0 | 2.95e-01 | 79.8% | 40.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954608 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.95 | 91.0 | 6.29e-01 | 100.0% | 35.8% |
| 4973289 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.90 | 85.0 | 5.92e-01 | 100.0% | 36.6% |
| 4959586 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.89 | 82.0 | 5.69e-01 | 100.0% | 33.3% |
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 81.0 | 5.70e-01 | 100.0% | 35.0% |
| 5029777 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.88 | 81.0 | 5.74e-01 | 100.0% | 36.1% |
| 5022020 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.86 | 81.0 | 5.69e-01 | 100.0% | 35.5% |
| 5035042 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.86 | 81.0 | 5.63e-01 | 100.0% | 34.2% |
| 5003620 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.86 | 80.0 | 5.28e-01 | 100.0% | 27.8% |
| 5011495 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.82 | 75.0 | 5.77e-01 | 100.0% | 46.5% |
| 3945876 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.80 | 71.0 | 5.06e-01 | 100.0% | 34.3% |
| 3253892 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.76 | 64.0 | 4.99e-01 | 100.0% | 43.6% |
| 2482197 | 2004.1.1.142 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Polyoma_lg_T_C | 0.73 | 63.0 | 5.66e-01 | 95.7% | 74.8% |
| 4955069 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 54.0 | 4.54e-01 | 96.8% | 53.1% |
| 3981677 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.64 | 57.0 | 4.19e-01 | 98.9% | 45.7% |
| 4308308 | 2004.1.1.771 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_lid_NAV1 | 0.63 | 55.0 | 3.81e-01 | 100.0% | 35.7% |
| 4890966 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 55.0 | 5.10e-01 | 97.9% | 87.3% |
| 4890993 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 54.0 | 4.87e-01 | 100.0% | 88.2% |
| 5051791 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.62 | 54.0 | 4.39e-01 | 98.9% | 60.0% |
| 3653298 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.61 | 51.0 | 4.06e-01 | 91.5% | 54.2% |
| 4218663 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 51.0 | 4.07e-01 | 96.8% | 53.7% |
| 4666226 | 2007.2.3.27 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › IpgD | 0.60 | 53.0 | 3.50e-01 | 100.0% | 59.8% |
| 3977065 | 3413.1.1.1 ↗ | alpha bundles › Inositol phosphate phosphatase sopB N-terminal domain › Inositol phosphate phosphatase sopB N-terminal domain › Inositol phosphate phosphatase sopB N-terminal domain › IpgD | 0.60 | 52.0 | 3.51e-01 | 100.0% | 48.3% |
| 3729591 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.59 | 51.0 | 3.03e-01 | 100.0% | 20.9% |
| 3830234 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.58 | 51.0 | 3.99e-01 | 98.9% | 60.5% |
| 3831653 | 2004.1.1.462 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NBD_SMAX1 | 0.58 | 49.0 | 3.19e-01 | 95.7% | 23.4% |
| 3659436 | 2004.1.1.153 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 | 0.58 | 51.0 | 3.34e-01 | 100.0% | 25.8% |
| 4948046 | 2004.1.1.1203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RMMBL | 0.58 | 49.0 | 4.00e-01 | 96.8% | 90.0% |
| 5059557 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.55 | 50.0 | 3.56e-01 | 100.0% | 43.3% |
| 5072054 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.54 | 46.0 | 3.73e-01 | 95.7% | 89.5% |
| 4890998 | 148.1.3.28 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_11 | 0.54 | 46.0 | 3.29e-01 | 100.0% | 30.2% |
| 3272236 | 2004.1.1.176 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Beta-Casp | 0.53 | 38.0 | 3.06e-01 | 76.6% | 85.1% |
| 2815987 | 3398.1.1.2 ↗ | a/b three-layered sandwiches › STING C-terminal domain › STING C-terminal domain › STING C-terminal domain › prok_STING | 0.52 | 35.0 | 3.17e-01 | 71.3% | 97.0% |
| 4975660 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.51 | 44.0 | 2.85e-01 | 100.0% | 21.0% |
| 3394463 | 2004.1.1.230 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like | 0.50 | 44.0 | 3.63e-01 | 100.0% | 78.9% |
| 3931768 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.50 | 29.0 | 2.69e-01 | 72.3% | 40.8% |
D3
medium
residues 95-150
Domain cluster:
representative