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IMGVR_UViG_3300038956_000107-3300038956-Ga0239562_004398_9017_9139

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300038956_000107-3300038956-Ga0239562_004398_9017_9139 ↗
Kingdom:: archaea

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-40

PDB

Domain cluster: representative

CATH (17)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3khyA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.79	48.0	2.99e-01	71.1%	12.2%
6zzx601	1.10.3460.10	Mainly Alpha › Orthogonal Bundle › Chlorophyll a-b binding protein › Chlorophyll a/b binding protein domain	0.76	52.0	3.17e-01	73.7%	12.4%
2pbiA02	1.10.1240.60	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 ›	0.75	61.0	4.56e-01	94.7%	35.6%
3fxdC00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.73	52.0	4.76e-01	89.5%	58.0%
5ja4D00	1.25.40.20	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain	0.72	63.0	4.24e-01	100.0%	67.1%
8fbnB01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.72	63.0	3.85e-01	97.4%	25.2%
2ia0A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.69	53.0	4.83e-01	89.5%	81.5%
4hbdA00	1.25.40.20	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain	0.66	51.0	3.24e-01	100.0%	16.7%
2e62A01	6.10.140.420	Special › Helix non-globular › Helix Hairpins ›	0.66	51.0	4.55e-01	92.1%	61.5%
1wdkB03	1.10.1040.50	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 ›	0.65	50.0	3.24e-01	92.1%	37.0%
2cfxA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	50.0	4.66e-01	89.5%	90.0%
4pcqA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.64	50.0	4.63e-01	89.5%	84.0%
1uhsA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.61	50.0	4.59e-01	100.0%	92.6%
2lpeA01	6.10.140.1120	Special › Helix non-globular › Helix Hairpins ›	0.59	48.0	3.99e-01	100.0%	56.4%
2jx4A01	6.10.140.460	Special › Helix non-globular › Helix Hairpins ›	0.58	46.0	4.44e-01	100.0%	83.3%
4u7bA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.58	40.0	4.00e-01	73.7%	100.0%
3qkaE02	1.10.287.2460	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.52	40.0	3.88e-01	84.2%	88.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4441101	2007.2.1.2 ↗	a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_2	0.86	74.0	4.56e-01	100.0%	18.7%
5051879	605.1.1.1 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA	0.80	61.0	4.79e-01	81.6%	42.7%
3261569	192.19.1.0 ↗	alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like	0.79	66.0	5.81e-01	100.0%	65.0%
4028973	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.71	59.0	3.67e-01	97.4%	41.3%
4436455	7022.1.1.1 ↗	alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT	0.70	57.0	3.25e-01	92.1%	8.8%
3699668	2004.1.1.164 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc	0.70	62.0	3.71e-01	100.0%	15.1%
3723532	109.4.1.681 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2	0.68	61.0	3.49e-01	100.0%	21.9%
3873779	2004.1.1.463 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin, Kinesin_assoc, Microtub_bd	0.68	60.0	3.41e-01	100.0%	9.8%
185993	6026.1.1.1 ↗	alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21	0.66	51.0	4.30e-01	92.1%	52.5%
3967276	5001.1.1.15 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TMR-DISM_7TM	0.65	55.0	3.40e-01	100.0%	16.4%
1877692	6026.1.1.1 ↗	alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › cwf21	0.63	56.0	5.11e-01	100.0%	75.0%
3384920	4146.1.1.0 ↗	alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like	0.60	46.0	4.61e-01	86.8%	87.5%
223738	3602.1.1.1 ↗	alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › SAM_KSR1_N	0.59	48.0	4.11e-01	100.0%	62.9%