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IMGVR_UViG_3300038957_000134-3300038957-Ga0239564_001391_3649_3879
Arc-VirIMGVR_UViG_3300038957_000134-3300038957-Ga0239564_001391_3649_3879
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-76
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q47A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 49.0 | 3.01e-01 | 82.9% | 43.4% |
| 3kdgB01 | 3.30.1540.20 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain | 0.63 | 44.0 | 4.11e-01 | 71.1% | 96.8% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 40.0 | 2.68e-01 | 71.1% | 41.7% |
| 3c7xA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.58 | 40.0 | 2.95e-01 | 71.1% | 41.8% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.60e-01 | 71.1% | 26.6% |
| 1genA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.57 | 39.0 | 2.87e-01 | 71.1% | 27.0% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 45.0 | 2.83e-01 | 89.5% | 43.0% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 3.98e-01 | 96.1% | 78.4% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.56 | 38.0 | 3.66e-01 | 71.1% | 94.3% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.67e-01 | 80.3% | 28.6% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 40.0 | 3.76e-01 | 77.6% | 85.7% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.53 | 36.0 | 3.15e-01 | 84.2% | 45.4% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.53 | 38.0 | 3.62e-01 | 86.8% | 64.0% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 3.54e-01 | 94.7% | 70.0% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.53 | 38.0 | 3.93e-01 | 92.1% | 81.9% |
| 2wp8A00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 39.0 | 2.85e-01 | 85.5% | 75.8% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 3.42e-01 | 88.2% | 57.9% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.84e-01 | 100.0% | 81.7% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.51 | 37.0 | 4.01e-01 | 92.1% | 96.7% |
| 2htaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 41.0 | 2.78e-01 | 90.8% | 56.6% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3787920 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.73 | 56.0 | 3.55e-01 | 81.6% | 27.9% |
| 3990350 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.72 | 51.0 | 3.37e-01 | 75.0% | 30.2% |
| 3178539 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.70 | 49.0 | 3.13e-01 | 73.7% | 26.5% |
| 4656873 | 4337.1.1.0 ↗ | a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain | 0.68 | 47.0 | 3.99e-01 | 71.1% | 96.0% |
| 5005139 | 4337.1.1.1 ↗ | a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › MutL_C | 0.68 | 50.0 | 4.25e-01 | 78.9% | 87.2% |
| 4026277 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 45.0 | 3.24e-01 | 75.0% | 72.8% |
| 3548690 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.61 | 41.0 | 4.18e-01 | 84.2% | 70.7% |
| 3181042 | 5.1.4.331 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30861 | 0.61 | 44.0 | 2.66e-01 | 78.9% | 26.1% |
| 4959202 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.59 | 44.0 | 4.14e-01 | 80.3% | 66.3% |
| 4284036 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.59 | 48.0 | 4.37e-01 | 92.1% | 65.7% |
| 5003276 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.59 | 36.0 | 3.88e-01 | 86.8% | 72.3% |
| 3696848 | 5.1.4.331 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30861 | 0.58 | 43.0 | 2.57e-01 | 80.3% | 24.4% |
| 4973622 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 36.0 | 3.63e-01 | 81.6% | 60.0% |
| 3603228 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.58 | 42.0 | 3.92e-01 | 86.8% | 61.1% |
| None | — | 0.58 | 40.0 | 2.59e-01 | 72.4% | 24.9% | |
| 3483861 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.57 | 43.0 | 4.23e-01 | 89.5% | 76.2% |
| 3213945 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.57 | 44.0 | 2.82e-01 | 82.9% | 93.7% |
| 5019170 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 38.0 | 3.34e-01 | 85.5% | 45.2% |
| 3289559 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 40.0 | 2.69e-01 | 76.3% | 67.0% |
| 4034474 | 4023.1.1.4 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DUF443 | 0.56 | 43.0 | 4.24e-01 | 82.9% | 95.0% |
| 3169646 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.56 | 43.0 | 4.05e-01 | 89.5% | 68.8% |
| 3638019 | 5.1.5.88 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N | 0.56 | 43.0 | 2.66e-01 | 84.2% | 26.0% |
| 3868838 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 46.0 | 3.68e-01 | 94.7% | 67.5% |
| 3754136 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.55 | 37.0 | 2.50e-01 | 71.1% | 29.6% |
| 3204312 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.55 | 40.0 | 2.53e-01 | 78.9% | 31.7% |
| 4829352 | 5.1.2.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N | 0.54 | 40.0 | 2.48e-01 | 78.9% | 21.9% |
| 3893163 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.54 | 39.0 | 3.26e-01 | 76.3% | 66.7% |
| 3465530 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 37.0 | 2.23e-01 | 72.4% | 22.5% |
| 3588213 | 12.3.1.45 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2264_C | 0.54 | 43.0 | 3.00e-01 | 89.5% | 91.5% |
| 4966454 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.54 | 37.0 | 3.51e-01 | 89.5% | 60.0% |
| 3576662 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 42.0 | 2.85e-01 | 86.8% | 40.0% |
| 3382445 | 5.1.2.59 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Beta-prop_NOL10_N | 0.53 | 38.0 | 3.29e-01 | 76.3% | 74.2% |
| 3786743 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 36.0 | 2.50e-01 | 71.1% | 44.6% |
| 5036626 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 37.0 | 2.38e-01 | 76.3% | 17.6% |
| 3918694 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.52 | 39.0 | 3.70e-01 | 89.5% | 67.8% |
| 4950402 | 881.4.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB | 0.51 | 35.0 | 3.01e-01 | 71.1% | 53.8% |
| 3056306 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.50 | 35.0 | 2.33e-01 | 72.4% | 28.9% |