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IMGVR_UViG_3300038974_000858-3300038974-Ga0416721_005573_1287_2315

Arc-Vir

IMGVR_UViG_3300038974_000858-3300038974-Ga0416721_005573_1287_2315

Identity

Kingdom:
archaea

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-95
PDB
Domain cluster: rep: MW960030.1__QWY82978.1__X__00024__D5-103
D2 medium residues 96-130_148-233
PDB
Domain cluster: rep: IMGVR_UViG_3300028603_001785-3300028603-Ga0265293_100239947__D105-124_142-213
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 51.0 5.31e-01 98.3% 88.2%
3vwbA00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 51.0 5.21e-01 99.2% 87.9%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.56 30.0 3.59e-01 76.0% 77.2%
4ai4A00 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.54 41.0 3.55e-01 78.5% 73.1%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.53 29.0 3.30e-01 94.2% 68.9%
3fdqA01 1.20.120.1030 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain 0.52 36.0 3.63e-01 70.2% 96.7%
4ciuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 34.0 2.97e-01 90.1% 42.2%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 30.0 3.44e-01 79.3% 78.2%
4x28C03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 33.0 3.17e-01 98.3% 54.5%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 28.0 3.57e-01 74.4% 90.3%
8hk0C01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 35.0 3.27e-01 99.2% 56.0%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 37.0 3.88e-01 97.5% 84.3%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3954906 378.1.1.23 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF222 0.71 59.0 5.45e-01 98.3% 70.3%
4659977 101.1.1.282 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF222 0.70 59.0 5.24e-01 99.2% 63.4%
3729318 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 54.0 5.20e-01 96.7% 76.4%
4017461 3860.1.1.0 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.65 50.0 5.47e-01 90.9% 100.0%
4940274 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 48.0 5.01e-01 85.1% 84.5%
3402083 101.1.1.112 ↗ alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.55 45.0 4.77e-01 92.6% 98.2%
4038279 1037.1.1.1 ↗ alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT 0.52 41.0 3.21e-01 86.8% 69.3%
3397701 101.1.1.112 ↗ alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.52 39.0 4.28e-01 83.5% 96.0%
D3 medium residues 277-342
PDB