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IMGVR_UViG_3300038979_000003-3300038979-Ga0188173_0390_2_352
Arc-VirIMGVR_UViG_3300038979_000003-3300038979-Ga0188173_0390_2_352
Identity
- Kingdom:
- archaea
Quality
71.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-115
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 48.0 | 3.94e-01 | 89.3% | 40.4% |
| 1hx6B01 | 2.70.9.30 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 | 0.62 | 51.0 | 3.69e-01 | 93.3% | 46.8% |
| 5tipA01 | 2.70.9.10 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 | 0.58 | 47.0 | 3.53e-01 | 88.0% | 47.9% |
| 2rh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 23.0 | 2.54e-01 | 72.0% | 43.8% |
| 1tzfA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 36.0 | 2.55e-01 | 73.3% | 94.4% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 274267 | 10.2.1.87 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › P3_C | 0.67 | 48.0 | 3.86e-01 | 89.3% | 37.7% |
| 2502637 | 10.2.1.45 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_Capsid_P3 | 0.61 | 51.0 | 3.62e-01 | 93.3% | 44.4% |
| 4019835 | 109.3.1.175 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › LHD_TRPY1 | 0.57 | 39.0 | 3.01e-01 | 73.3% | 30.0% |
| 3790424 | 2004.1.1.303 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC2_membrane_7 | 0.53 | 43.0 | 2.94e-01 | 97.3% | 86.9% |
| 3360871 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.52 | 42.0 | 2.73e-01 | 94.7% | 30.0% |
| None | — | 0.52 | 42.0 | 2.82e-01 | 92.0% | 43.2% | |
| 3594224 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 2.97e-01 | 96.0% | 33.3% |
| 3582919 | 2004.1.1.303 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC2_membrane_7 | 0.52 | 42.0 | 3.31e-01 | 94.7% | 59.5% |
| 3382550 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 3.17e-01 | 94.7% | 61.8% |
| 4987730 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.52 | 34.0 | 2.60e-01 | 76.0% | 25.6% |
| 3176885 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.52 | 42.0 | 2.54e-01 | 94.7% | 16.0% |
| 3903854 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 2.88e-01 | 96.0% | 32.0% |
| None | — | 0.51 | 41.0 | 2.82e-01 | 96.0% | 33.6% | |
| 3701109 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 2.84e-01 | 96.0% | 31.0% |
| 3594385 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.90e-01 | 100.0% | 47.1% |
| 3213424 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 41.0 | 2.85e-01 | 94.7% | 34.8% |
| 3366282 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 40.0 | 2.44e-01 | 96.0% | 50.9% |
| 3793602 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 42.0 | 2.95e-01 | 97.3% | 54.6% |
| 3260747 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 34.0 | 2.55e-01 | 70.7% | 40.5% |
| 3886460 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 41.0 | 2.73e-01 | 94.7% | 79.2% |
| 3824017 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.50 | 41.0 | 2.71e-01 | 94.7% | 38.9% |