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IMGVR_UViG_3300039258_000041-3300039258-Ga0427926_001465_13235_13537
Arc-VirIMGVR_UViG_3300039258_000041-3300039258-Ga0427926_001465_13235_13537
Identity
- Kingdom:
- archaea
Quality
74.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2q2tA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.90 | 73.0 | 5.54e-01 | 87.8% | 40.6% |
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 38.0 | 2.70e-01 | 95.9% | 21.6% |
| 4f0qA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 46.0 | 3.15e-01 | 93.9% | 74.5% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.50 | 41.0 | 3.38e-01 | 93.9% | 85.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2831772 | 2.1.1.65 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 | 0.82 | 67.0 | 5.04e-01 | 89.8% | 38.6% |
| 4125755 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.65 | 36.0 | 2.02e-01 | 87.8% | 4.4% |
| 3275438 | 109.4.1.1945 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_Maestro, HEAT_Maestro_2, HEAT_MROH2B_1st, HEAT_MROH2B_C | 0.62 | 45.0 | 2.39e-01 | 79.6% | 4.6% |
| 3585180 | 109.4.1.1316 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, HAT_PRP39_N, HAT_PRP39_C | 0.61 | 42.0 | 2.37e-01 | 73.5% | 12.1% |
| 4029192 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.58 | 37.0 | 2.19e-01 | 85.7% | 8.5% |
| 3909552 | 316.1.1.37 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › FKTN_N | 0.54 | 43.0 | 2.99e-01 | 100.0% | 65.3% |
| 5082698 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.53 | 38.0 | 3.20e-01 | 89.8% | 42.2% |
| 3731446 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 36.0 | 2.52e-01 | 71.4% | 90.8% |
| 3206278 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 37.0 | 2.66e-01 | 75.5% | 41.9% |
| 3768112 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.53 | 36.0 | 2.50e-01 | 75.5% | 78.5% |
| 3220259 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 42.0 | 2.60e-01 | 95.9% | 84.3% |
| 2527184 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.51 | 44.0 | 3.23e-01 | 100.0% | 87.1% |