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IMGVR_UViG_3300039258_000152-3300039258-Ga0427926_008384_1531_1998
Arc-VirIMGVR_UViG_3300039258_000152-3300039258-Ga0427926_008384_1531_1998
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-74_103-123
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4261744 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.66 | 56.0 | 5.11e-01 | 92.6% | 88.8% |
| 3989004 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.58 | 40.0 | 2.87e-01 | 73.7% | 62.6% |
| 2514749 | 223.1.1.17 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › ScfRs | 0.51 | 24.0 | 3.03e-01 | 89.5% | 75.5% |
D2
medium
residues 75-102_124-155
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 42.0 | 3.29e-01 | 70.0% | 83.9% |
| 3ccfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 48.0 | 3.27e-01 | 88.3% | 54.6% |
| 6nqbF00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.58 | 44.0 | 4.10e-01 | 90.0% | 64.9% |
| 3tmaA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.58 | 41.0 | 3.03e-01 | 86.7% | 28.4% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.57 | 45.0 | 4.41e-01 | 91.7% | 95.6% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 44.0 | 3.21e-01 | 88.3% | 94.0% |
| 2jz7A00 | 3.30.1660.30 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Selenium-binding protein | 0.56 | 45.0 | 4.11e-01 | 88.3% | 70.4% |
| 1vphB00 | 2.60.120.460 | Mainly Beta › Sandwich › Jelly Rolls › YjbQ-like | 0.55 | 41.0 | 3.29e-01 | 85.0% | 56.9% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.58e-01 | 88.3% | 49.5% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.72e-01 | 90.0% | 54.7% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.53 | 40.0 | 3.19e-01 | 86.7% | 93.6% |
| 6ip0A01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.51 | 38.0 | 2.39e-01 | 78.3% | 39.0% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.50e-01 | 91.7% | 55.9% |
| 1zhsA01 | 3.30.1490.230 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.51 | 40.0 | 4.13e-01 | 88.3% | 96.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5081639 | 256.1.1.1 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Archease | 0.69 | 55.0 | 5.15e-01 | 86.7% | 98.7% |
| 4016977 | 6094.1.1.3 ↗ | a+b two layers › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › KS-MAT linker domain in fatty acid synthase › CurL-like_PKS_C | 0.65 | 53.0 | 4.75e-01 | 86.7% | 76.2% |
| 3222045 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 46.0 | 3.72e-01 | 83.3% | 45.2% |
| 3365827 | 256.1.1.6 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › HMA | 0.59 | 46.0 | 4.78e-01 | 91.7% | 92.7% |
| 3934867 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 43.0 | 2.48e-01 | 86.7% | 46.5% |
| 5079705 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.57 | 44.0 | 3.15e-01 | 88.3% | 42.5% |
| 3730456 | 846.1.1.1 ↗ | a+b two layers › YjbQ-like (Pfam 01894) › YjbQ-like (Pfam 01894) › YjbQ-like (Pfam 01894) › UPF0047 | 0.57 | 41.0 | 3.23e-01 | 80.0% | 70.6% |
| 4165721 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.56 | 44.0 | 4.24e-01 | 90.0% | 74.3% |
| 5004240 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.56 | 41.0 | 3.47e-01 | 81.7% | 100.0% |
| 4948080 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 39.0 | 3.57e-01 | 90.0% | 54.1% |
| 5000612 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.56 | 43.0 | 4.13e-01 | 91.7% | 72.9% |
| 4030007 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 45.0 | 2.81e-01 | 100.0% | 36.6% |
| 3344486 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.55 | 38.0 | 2.14e-01 | 71.7% | 20.0% |
| 4026040 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.55 | 43.0 | 2.49e-01 | 85.0% | 94.1% |
| 3827561 | 304.8.1.106 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Saccharop_dh_N | 0.55 | 45.0 | 3.83e-01 | 91.7% | 56.0% |
| 3340063 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.55 | 41.0 | 4.33e-01 | 91.7% | 89.1% |
| 3654160 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.54 | 41.0 | 3.86e-01 | 90.0% | 66.7% |
| 3490869 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.53 | 39.0 | 3.65e-01 | 90.0% | 61.3% |
| 3724699 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.53 | 36.0 | 3.09e-01 | 90.0% | 43.0% |
| 3389591 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.50 | 38.0 | 3.24e-01 | 88.3% | 100.0% |