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IMGVR_UViG_3300039326_000229-3300039326-Ga0427941_0023888_934_1422

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300039326_000229-3300039326-Ga0427941_0023888_934_1422 ↗
Kingdom:: archaea

Quality

64.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 90-150

PDB

D2 medium residues 1-71

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF24623.3 best	Phage_zn_bind_8	36.5	4.60e-09	87.3%	61.4%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2eshA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.60	43.0	3.64e-01	74.6%	71.1%
3tgnB02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.54	39.0	4.18e-01	77.5%	100.0%
3zcoA00	1.10.10.2450	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.53	40.0	3.36e-01	81.7%	82.7%
1t98A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	39.0	3.65e-01	78.9%	85.1%
5e1wA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	39.0	2.98e-01	80.3%	39.3%

ECOD (20)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5045205	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.60	45.0	4.20e-01	80.3%	92.2%
1421671	101.1.2.18 ↗	alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e	0.58	45.0	3.52e-01	83.1%	76.0%
4195125	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	44.0	4.43e-01	81.7%	100.0%
3550228	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	40.0	3.42e-01	74.6%	62.5%
3257383	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.56	36.0	3.28e-01	84.5%	48.4%
5055105	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.56	38.0	3.83e-01	73.2%	71.4%
4992272	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.56	40.0	3.42e-01	77.5%	65.0%
3951258	101.1.2.48 ↗	alpha arrays › HTH › HTH › winged helix domain › PadR	0.56	38.0	3.03e-01	71.8%	48.7%
5016572	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	45.0	4.17e-01	88.7%	93.3%
3930041	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	39.0	3.55e-01	76.1%	94.0%
3264177	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.54	33.0	3.28e-01	87.3%	56.0%
4863582	101.1.2.151 ↗	alpha arrays › HTH › HTH › winged helix domain › COR	0.54	38.0	3.98e-01	77.5%	83.1%
5011599	101.1.2.14 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_5	0.54	39.0	3.57e-01	77.5%	68.4%
5077265	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	40.0	3.58e-01	81.7%	67.6%
4961822	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.54	40.0	3.73e-01	80.3%	76.7%
3593666	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.53	33.0	3.65e-01	93.0%	84.6%
4649222	101.1.2.15 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR	0.52	39.0	3.22e-01	80.3%	50.8%
3838246	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	42.0	3.71e-01	91.5%	85.5%
4316044	101.1.2.388 ↗	alpha arrays › HTH › HTH › winged helix domain › YjhX_toxin	0.52	39.0	3.59e-01	80.3%	78.9%
4973783	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	36.0	3.34e-01	74.6%	80.0%