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IMGVR_UViG_3300040933_000005-3300040933-Ga0418756_001197_3_2246
Arc-VirIMGVR_UViG_3300040933_000005-3300040933-Ga0418756_001197_3_2246
Identity
- Kingdom:
- archaea
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 196-207_222-331
Domain cluster:
rep: IMGVR_UViG_3300040931_000028-3300040931-Ga0418753_000113_15829_19095__D9-116
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25596.2 best | CPSase_L_D1 | 136.6 | 5.10e-40 | 91.0% | 95.8% |
D2
high
residues 598-743
Domain cluster:
rep: IMGVR_UViG_3300040931_000028-3300040931-Ga0418753_000113_15829_19095__D933-1085
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02142.28 best | MGS | 61.5 | 9.40e-17 | 65.8% | 98.9% |
D3
medium
residues 12-182
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02787.26 best | CPSase_L_D3 | 90.4 | 8.60e-26 | 46.2% | 96.3% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5douA01 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.95 | 90.0 | 9.10e-01 | 97.7% | 100.0% |
| 1a9xA04 | 1.10.1030.10 | Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain | 0.93 | 65.0 | 6.99e-01 | 71.3% | 83.3% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 22.0 | 3.39e-01 | 85.4% | 98.5% |
| 3t8vA05 | 1.25.50.10 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain | 0.52 | 45.0 | 3.66e-01 | 95.9% | 82.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947271 | 101.1.2.936 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D1 | 0.97 | 68.0 | 7.24e-01 | 71.9% | 83.9% |
| 4411930 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.96 | 67.0 | 7.34e-01 | 71.9% | 83.4% |
| 3302719 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.96 | 68.0 | 7.35e-01 | 72.5% | 84.7% |
| 5052945 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.95 | 68.0 | 7.14e-01 | 71.9% | 83.9% |
| 3506991 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.95 | 66.0 | 7.19e-01 | 70.2% | 84.1% |
| 5062650 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.95 | 68.0 | 8.07e-01 | 76.0% | 100.0% |
| 4987636 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.95 | 67.0 | 7.97e-01 | 71.9% | 100.0% |
| 4487757 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.94 | 67.0 | 6.96e-01 | 71.9% | 85.0% |
| 5067887 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.94 | 68.0 | 8.04e-01 | 73.1% | 100.0% |
| 4027231 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.94 | 65.0 | 6.70e-01 | 70.8% | 84.2% |
| 5016203 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.93 | 66.0 | 6.83e-01 | 71.3% | 80.0% |
| 5040439 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.93 | 64.0 | 7.00e-01 | 71.9% | 82.1% |
| 4006611 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.93 | 64.0 | 6.77e-01 | 70.2% | 79.4% |
| 3592377 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.92 | 64.0 | 6.92e-01 | 70.8% | 83.3% |
| 4012680 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.92 | 65.0 | 7.03e-01 | 72.5% | 82.0% |
| 3887078 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.92 | 65.0 | 6.88e-01 | 71.9% | 81.9% |
| 4466009 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.92 | 64.0 | 6.20e-01 | 70.8% | 81.6% |
| 4376172 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.92 | 65.0 | 6.74e-01 | 71.9% | 80.0% |
| 3499811 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 64.0 | 5.90e-01 | 70.8% | 69.3% |
| 4125982 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.90 | 65.0 | 6.35e-01 | 72.5% | 87.2% |
| 4518397 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.89 | 63.0 | 6.76e-01 | 71.9% | 82.0% |
| 4143936 | 101.1.2.40 ↗ | alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 | 0.88 | 63.0 | 6.75e-01 | 72.5% | 83.3% |
| 4964523 | 101.1.1.538 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CPSase_L_D3 | 0.88 | 54.0 | 5.90e-01 | 95.9% | 73.1% |
| 5021231 | 101.1.1.544 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 | 0.61 | 31.0 | 4.40e-01 | 87.7% | 100.0% |
| 5021233 | 101.1.6.40 ↗ | alpha arrays › HTH › HTH › TrpR › DUF1670 | 0.59 | 29.0 | 3.98e-01 | 86.5% | 91.1% |
D4
medium
residues 332-409
Domain cluster:
rep: CAKLQH020000021.1__CAH1091819.1__SAMEA5780036_02818__00037__D145-207
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02786.23 best | CPSase_L_D2 | 42.1 | 9.90e-11 | 92.3% | 34.1% |
D5
medium
residues 410-597
Domain cluster:
rep: IMGVR_UViG_3300040931_000028-3300040931-Ga0418753_000113_15829_19095__D661-692_764-932
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15632.12 best | ATPgrasp_Ter | 32.0 | 1.40e-07 | 72.9% | 54.2% |
| PF02786.23 | CPSase_L_D2 | 67.7 | 1.50e-18 | 69.7% | 60.7% |