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IMGVR_UViG_3300041418_000114-3300041418-Ga0439244_0007215_27_332

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300041418_000114-3300041418-Ga0439244_0007215_27_332 ↗
Kingdom:: archaea

Quality

83.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-83

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5a72A00	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.80	68.0	5.31e-01	100.0%	45.2%
6gpxB00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.64	50.0	3.52e-01	85.7%	66.5%
2hs5A02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.64	43.0	3.61e-01	70.1%	72.1%
2rp4A00	6.10.280.60	Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain	0.60	44.0	4.56e-01	76.6%	95.8%
7c1iA01	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.59	42.0	3.85e-01	74.0%	64.0%
2katA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.59	40.0	3.57e-01	70.1%	87.0%
7oq4Z01	1.20.120.950	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062	0.59	41.0	3.84e-01	72.7%	84.7%
2di3B02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.59	50.0	4.02e-01	96.1%	96.1%
3qo8A01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.53	36.0	3.30e-01	70.1%	95.3%
2kjgA00	1.20.120.970	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.51	35.0	3.22e-01	70.1%	66.7%
6todA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.51	43.0	3.00e-01	100.0%	41.9%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3237394	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.62	43.0	3.50e-01	72.7%	68.4%
5054324	5060.2.1.0 ↗	alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain	0.62	53.0	4.57e-01	94.8%	65.0%
3491190	544.1.1.0 ↗	alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18	0.59	40.0	3.57e-01	70.1%	77.1%
3566747	109.4.1.562 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CANIN	0.55	47.0	3.02e-01	98.7%	34.5%
3630475	109.4.1.2452 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_10	0.55	46.0	3.52e-01	94.8%	44.7%
3856076	109.4.1.562 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CANIN	0.54	38.0	2.75e-01	74.0%	71.6%
3656389	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	47.0	2.87e-01	97.4%	57.4%
3333330	109.4.1.1615 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30357	0.51	38.0	2.86e-01	84.4%	79.6%
3273844	109.4.1.1299 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Drf_FH3, Drf_GBD, FH3_FHOD1-3	0.50	40.0	2.84e-01	88.3%	57.2%