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IMGVR_UViG_3300041587_000048-3300041587-Ga0400286_01993_6707_6832

Arc-Vir

IMGVR_UViG_3300041587_000048-3300041587-Ga0400286_01993_6707_6832

Quality

81.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-40
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 63.0 4.73e-01 97.4% 36.7%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.71 59.0 4.18e-01 94.7% 80.8%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.71 56.0 4.18e-01 92.1% 34.6%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.71 59.0 3.78e-01 97.4% 33.5%
2vnuD01 2.40.50.690 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 55.0 4.18e-01 94.7% 71.8%
3eyyA02 3.30.1490.190 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain 0.69 47.0 4.39e-01 76.3% 54.9%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.68 54.0 4.12e-01 92.1% 36.7%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.67 53.0 4.07e-01 100.0% 43.4%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 56.0 3.63e-01 97.4% 27.2%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 53.0 4.59e-01 94.7% 84.4%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 54.0 3.90e-01 94.7% 36.5%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 49.0 4.48e-01 92.1% 57.9%
2im9A02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.66 55.0 3.70e-01 97.4% 25.9%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.66 54.0 4.06e-01 100.0% 52.9%
1rpyB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 49.0 4.00e-01 100.0% 40.7%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.65 51.0 3.95e-01 94.7% 36.6%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.65 51.0 3.97e-01 97.4% 92.0%
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.65 53.0 3.79e-01 94.7% 35.9%
5oomK00 3.90.1180.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 0.65 43.0 2.87e-01 71.1% 15.3%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 51.0 3.75e-01 94.7% 35.5%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 52.0 3.03e-01 97.4% 89.9%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.64 49.0 3.89e-01 97.4% 48.5%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 46.0 3.20e-01 84.2% 40.6%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 52.0 3.07e-01 97.4% 88.9%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 50.0 3.97e-01 94.7% 50.6%
1vw4H00 3.90.1180.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 0.61 42.0 2.91e-01 73.7% 20.3%
3k1rA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.61 45.0 3.38e-01 86.8% 81.1%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 42.0 3.33e-01 84.2% 31.5%
7pluA01 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 49.0 3.65e-01 100.0% 64.6%
2x2zD03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.59 39.0 4.04e-01 76.3% 89.3%
4mboA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 3.20e-01 94.7% 80.1%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 45.0 3.25e-01 97.4% 27.5%
1wi5A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 43.0 3.72e-01 100.0% 48.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 3.94e-01 94.7% 57.6%
3k5bA02 3.30.2320.30 Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal 0.57 39.0 3.14e-01 76.3% 53.9%
2o1qA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 43.0 3.24e-01 100.0% 94.5%
4lqbA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 43.0 3.11e-01 92.1% 27.7%
6yllA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 3.72e-01 100.0% 91.5%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.56 44.0 4.26e-01 97.4% 97.9%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 40.0 3.85e-01 94.7% 66.0%
2bjoA01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 37.0 3.65e-01 78.9% 63.4%
2y8tA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.55 41.0 3.79e-01 86.8% 60.0%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.21e-01 94.7% 55.3%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 40.0 2.55e-01 92.1% 14.9%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.25e-01 94.7% 35.1%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 42.0 3.07e-01 100.0% 39.1%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 42.0 3.72e-01 100.0% 61.5%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.52 39.0 3.69e-01 100.0% 75.4%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.52e-01 86.8% 58.9%
4m7xA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 3.05e-01 94.7% 40.7%
1xjhA00 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.51 38.0 3.54e-01 100.0% 75.8%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3389852 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.81 63.0 5.57e-01 86.8% 78.2%
3832954 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.80 65.0 3.65e-01 86.8% 40.3%
3615536 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 65.0 4.75e-01 100.0% 36.1%
3872231 391.1.2.11 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.77 55.0 4.93e-01 89.5% 54.5%
3594572 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 4.23e-01 100.0% 29.0%
3266245 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 62.0 4.38e-01 94.7% 34.2%
4150308 391.1.2.11 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.75 54.0 4.08e-01 89.5% 31.6%
4441936 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.73 57.0 3.99e-01 92.1% 26.2%
3302496 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 58.0 4.33e-01 94.7% 75.2%
3261596 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.73 57.0 4.08e-01 94.7% 72.0%
3266483 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 60.0 4.32e-01 94.7% 37.3%
3258813 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.72 57.0 4.23e-01 94.7% 72.7%
4002042 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 56.0 4.24e-01 94.7% 85.7%
3196835 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.71 55.0 4.03e-01 94.7% 71.7%
4946165 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 54.0 4.89e-01 94.7% 60.0%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 55.0 4.59e-01 94.7% 48.6%
3738729 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.71 55.0 4.26e-01 94.7% 76.0%
4028176 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 59.0 4.23e-01 94.7% 37.3%
3338602 2008.1.1.107 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NERD 0.70 58.0 3.69e-01 94.7% 32.4%
3500713 220.1.1.56 beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.70 56.0 3.98e-01 94.7% 32.8%
3231891 394.1.1.0 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.70 54.0 5.07e-01 86.8% 70.2%
3961488 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.69 45.0 2.89e-01 94.7% 13.5%
3858967 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.69 49.0 5.22e-01 81.6% 100.0%
3461921 4.1.1.118 beta barrels › SH3 › SH3 › SH3 › SH3_15 0.69 51.0 3.86e-01 86.8% 31.0%
4862542 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.69 52.0 4.59e-01 89.5% 55.6%
3204568 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.69 53.0 3.68e-01 94.7% 60.8%
4927852 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 4.46e-01 100.0% 48.9%
5072324 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.68 57.0 4.38e-01 100.0% 50.5%
3747392 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.68 54.0 4.75e-01 100.0% 58.5%
4072685 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.68 53.0 4.44e-01 94.7% 50.7%
4056471 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.68 52.0 4.28e-01 92.1% 92.5%
5032233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 4.10e-01 100.0% 38.3%
4080479 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.68 51.0 4.13e-01 94.7% 67.8%
3484962 2.1.1.82 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_CSD1 0.68 53.0 3.90e-01 97.4% 76.7%
3388887 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.67 54.0 4.66e-01 97.4% 61.5%
3861569 220.1.1.56 beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.67 56.0 3.96e-01 94.7% 35.7%
3384455 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 54.0 3.57e-01 100.0% 23.2%
3225123 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 55.0 5.25e-01 94.7% 95.6%
3400005 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.66 52.0 4.68e-01 97.4% 66.7%
4024914 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.66 47.0 4.20e-01 94.7% 51.7%
3705893 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.66 54.0 3.14e-01 97.4% 80.3%
3934016 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 50.0 2.92e-01 89.5% 9.2%
3769507 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.65 48.0 4.19e-01 94.7% 48.6%
3712932 220.1.1.263 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_29 0.65 53.0 3.63e-01 100.0% 48.4%
4369733 375.1.1.145 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FdhE_C 0.65 47.0 3.88e-01 81.6% 41.3%
3713222 220.1.1.263 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_29 0.64 50.0 3.76e-01 94.7% 37.3%
3699097 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 52.0 3.99e-01 94.7% 43.0%
3606772 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 52.0 3.05e-01 97.4% 90.4%
4211951 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.64 52.0 4.20e-01 97.4% 46.3%
4263806 4099.1.1.3 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.64 51.0 4.56e-01 97.4% 67.8%
3276209 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 47.0 4.36e-01 94.7% 61.8%
958448 6.1.1.9 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Botulinum_HA-17 0.63 46.0 3.19e-01 84.2% 40.3%
3934850 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.48e-01 94.7% 27.5%
3584575 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 48.0 3.26e-01 94.7% 24.7%
3502043 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 50.0 4.46e-01 94.7% 70.0%
4446725 702.1.1.4 beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack 0.63 49.0 3.33e-01 97.4% 36.6%
3925471 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 49.0 4.37e-01 94.7% 61.7%
5063466 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.62 46.0 3.62e-01 84.2% 40.0%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.62 50.0 3.62e-01 97.4% 73.3%
4962256 101.1.2.937 alpha arrays › HTH › HTH › winged helix domain › PF25943 0.62 46.0 3.56e-01 100.0% 32.7%
3463688 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.62 51.0 3.27e-01 100.0% 19.6%
3403344 386.1.1.4 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.62 53.0 4.63e-01 100.0% 90.0%
4599971 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.62 48.0 4.04e-01 94.7% 94.7%
4480316 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.62 49.0 4.02e-01 94.7% 95.0%
2675169 2490.2.1.1 a/b three-layered sandwiches › Ribosomal protein L13/L15p/L18e/L32e › Ribosomal protein L13 and L16-A › Ribosomal protein L13 and L16-A › Ribosomal_L13 0.62 42.0 2.74e-01 71.1% 14.0%
None 0.61 44.0 2.59e-01 86.8% 8.5%
4424212 2492.1.1.6 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin 0.61 49.0 2.90e-01 100.0% 83.9%
4002958 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.60 42.0 4.05e-01 86.8% 62.0%
4992194 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.60 45.0 3.53e-01 84.2% 40.0%
4141047 593.1.1.0 alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.58 47.0 2.88e-01 92.1% 42.3%
3809150 3876.1.1.1 few secondary structure elements › Embryo surrounding factor (ESF) peptides › Embryo surrounding factor (ESF) peptides › Embryo surrounding factor (ESF) peptides › ESF1 0.55 43.0 4.00e-01 92.1% 77.4%
3901590 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.53 41.0 3.15e-01 92.1% 41.0%