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IMGVR_UViG_3300042096_000031-3300042096-Ga0453245_001009_2803_3438
Arc-VirIMGVR_UViG_3300042096_000031-3300042096-Ga0453245_001009_2803_3438
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-172
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
D2
medium
residues 1-69
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xilA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.59 | 46.0 | 3.83e-01 | 88.4% | 68.8% |
| 6ieoA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.58 | 39.0 | 3.60e-01 | 71.0% | 91.5% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.20e-01 | 75.4% | 86.4% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 43.0 | 4.28e-01 | 81.2% | 90.3% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 42.0 | 2.60e-01 | 78.3% | 69.8% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.97e-01 | 78.3% | 69.9% |
| 1fl2A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 40.0 | 3.29e-01 | 73.9% | 79.0% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.56 | 43.0 | 3.86e-01 | 87.0% | 80.8% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 4.31e-01 | 71.0% | 96.2% |
| 3f8dA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 38.0 | 3.19e-01 | 71.0% | 82.1% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 43.0 | 3.95e-01 | 88.4% | 83.7% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 40.0 | 3.84e-01 | 78.3% | 80.2% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 37.0 | 4.04e-01 | 72.5% | 85.7% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 37.0 | 3.87e-01 | 71.0% | 85.9% |
| 7e52A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 38.0 | 3.13e-01 | 73.9% | 78.9% |
| 1pnjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 37.0 | 3.51e-01 | 72.5% | 81.4% |
| 5ff5A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 38.0 | 2.69e-01 | 75.4% | 51.9% |
| 3dghA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 39.0 | 3.29e-01 | 78.3% | 82.1% |
| 3o2zP00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 3.14e-01 | 72.5% | 54.3% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.86e-01 | 76.8% | 74.0% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 43.0 | 3.61e-01 | 97.1% | 71.6% |
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 4.02e-01 | 76.8% | 96.2% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 37.0 | 3.86e-01 | 71.0% | 79.4% |
| 1atiB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 41.0 | 3.59e-01 | 85.5% | 75.9% |
| 4f9zA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 39.0 | 3.40e-01 | 81.2% | 97.4% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 39.0 | 2.63e-01 | 87.0% | 22.9% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.52e-01 | 87.0% | 78.7% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.39e-01 | 94.2% | 81.3% |
| 2krtA01 | 3.10.450.270 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 34.0 | 3.13e-01 | 72.5% | 69.9% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 42.0 | 3.40e-01 | 98.6% | 70.8% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598807 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 52.0 | 5.24e-01 | 79.7% | 92.8% |
| 4145391 | 3174.2.1.1 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA | 0.62 | 47.0 | 4.97e-01 | 79.7% | 100.0% |
| 3582834 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.61 | 48.0 | 4.31e-01 | 85.5% | 89.5% |
| 3257462 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 3.81e-01 | 75.4% | 91.0% |
| 5077212 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.60 | 42.0 | 3.48e-01 | 73.9% | 96.2% |
| 4259370 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 39.0 | 4.34e-01 | 71.0% | 85.5% |
| 3745210 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.59 | 42.0 | 4.58e-01 | 76.8% | 100.0% |
| 4438983 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 42.0 | 3.77e-01 | 75.4% | 60.0% |
| 3609256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 45.0 | 4.23e-01 | 84.1% | 82.4% |
| 3486271 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 42.0 | 3.83e-01 | 75.4% | 57.8% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 43.0 | 3.79e-01 | 79.7% | 60.0% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 41.0 | 3.84e-01 | 75.4% | 60.0% |
| 3581143 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.57 | 40.0 | 4.13e-01 | 75.4% | 76.9% |
| 3819340 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.57 | 44.0 | 3.67e-01 | 84.1% | 81.7% |
| 3931161 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 3.55e-01 | 79.7% | 72.2% |
| 3507146 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 40.0 | 3.78e-01 | 75.4% | 65.9% |
| 3577505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 41.0 | 3.82e-01 | 78.3% | 62.4% |
| 3226844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 40.0 | 3.85e-01 | 75.4% | 66.3% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 40.0 | 3.77e-01 | 75.4% | 62.4% |
| 3598556 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 38.0 | 3.28e-01 | 71.0% | 60.0% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 40.0 | 3.75e-01 | 78.3% | 61.2% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 40.0 | 3.65e-01 | 75.4% | 57.8% |
| 3997949 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 39.0 | 3.64e-01 | 75.4% | 60.0% |
| 5033076 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 36.0 | 3.95e-01 | 72.5% | 83.6% |
| 3523802 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 4.04e-01 | 71.0% | 90.0% |
| 3336463 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 40.0 | 3.91e-01 | 78.3% | 69.2% |
| 3504417 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 40.0 | 3.71e-01 | 78.3% | 61.1% |
| 3936926 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 39.0 | 4.01e-01 | 73.9% | 81.5% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.55 | 40.0 | 3.96e-01 | 78.3% | 78.7% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.55 | 38.0 | 3.79e-01 | 71.0% | 75.7% |
| 3501699 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.73e-01 | 75.4% | 65.0% |
| 3481670 | 4205.1.1.3 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 | 0.54 | 44.0 | 3.22e-01 | 91.3% | 92.5% |
| 4932368 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.54 | 40.0 | 2.74e-01 | 81.2% | 27.5% |
| 3883165 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 39.0 | 3.41e-01 | 75.4% | 53.0% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 39.0 | 3.69e-01 | 78.3% | 64.7% |
| 4963580 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.53 | 36.0 | 3.49e-01 | 71.0% | 86.3% |
| 3660454 | 5.1.5.96 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 | 0.53 | 40.0 | 2.75e-01 | 87.0% | 34.6% |
| 3660466 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.52 | 42.0 | 2.56e-01 | 94.2% | 36.5% |
| 3528376 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 37.0 | 2.92e-01 | 76.8% | 64.5% |
| 3628265 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 39.0 | 2.49e-01 | 85.5% | 21.6% |
| 3640047 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 40.0 | 2.64e-01 | 89.9% | 33.1% |
| 4278307 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.51 | 38.0 | 2.96e-01 | 87.0% | 76.3% |
| 3920343 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.51 | 36.0 | 2.89e-01 | 76.8% | 70.0% |
| 3578331 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.51 | 38.0 | 3.86e-01 | 84.1% | 100.0% |
| 3224154 | 5.1.4.304 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd | 0.51 | 40.0 | 2.64e-01 | 91.3% | 84.3% |
| 3619987 | 3246.1.1.3 ↗ | few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_2 | 0.50 | 37.0 | 3.51e-01 | 79.7% | 68.2% |
| 5062107 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 37.0 | 2.55e-01 | 84.1% | 23.3% |