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IMGVR_UViG_3300042102_000385-3300042102-Ga0453251_000372_123_290
Arc-VirIMGVR_UViG_3300042102_000385-3300042102-Ga0453251_000372_123_290
Identity
- Kingdom:
- archaea
Quality
74.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-55
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 48.0 | 4.69e-01 | 76.4% | 91.9% |
| 3cz6A01 | 1.20.120.1480 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 46.0 | 3.88e-01 | 92.7% | 50.0% |
| 5exeA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 42.0 | 2.86e-01 | 96.4% | 55.2% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.53 | 38.0 | 2.29e-01 | 80.0% | 61.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3644022 | 6055.1.1.3 ↗ | extended segments › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Preprotein translocase subunit YajC › Utp11 | 0.69 | 52.0 | 4.27e-01 | 83.6% | 71.4% |
| 3180551 | 109.4.1.93 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TAF6_C | 0.67 | 45.0 | 2.88e-01 | 70.9% | 14.7% |
| 4001161 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.63 | 46.0 | 2.75e-01 | 90.9% | 11.8% |
| 4275327 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.57 | 43.0 | 2.70e-01 | 80.0% | 22.6% |
| 3470872 | 7051.1.1.1 ↗ | alpha arrays › C-terminal domain of Npl4 › C-terminal domain of Npl4 › C-terminal domain of Npl4 › NPL4 | 0.53 | 43.0 | 3.39e-01 | 90.9% | 65.0% |