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IMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_12269_16051
Arc-VirIMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_12269_16051
Identity
- Kingdom:
- archaea
Quality
48.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 76-195_343-405
Domain cluster:
rep: OR354825.1__WNM51604.1__CoNPh2_CDS0050__00048__D273-380_559-584
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 25.0 | 2.85e-01 | 87.4% | 52.9% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 37.0 | 3.19e-01 | 71.6% | 96.0% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.50 | 22.0 | 2.86e-01 | 98.4% | 69.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4032310 | 159.1.2.6 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail | 0.92 | 74.0 | 8.20e-01 | 84.2% | 100.0% |
| 3980709 | 103.4.1.27 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TMP_2 | 0.71 | 51.0 | 5.47e-01 | 73.8% | 98.8% |
| 3768487 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 36.0 | 3.07e-01 | 72.7% | 86.5% |
D2
medium
residues 196-250
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qo0D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 5.41e-01 | 78.2% | 97.8% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 55.0 | 5.44e-01 | 87.3% | 87.9% |
| 7dfeA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.69 | 56.0 | 4.41e-01 | 94.5% | 89.0% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.69 | 57.0 | 4.01e-01 | 94.5% | 55.7% |
| 1bvsF03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.68 | 46.0 | 4.92e-01 | 85.5% | 86.7% |
| 5jolA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.67 | 49.0 | 4.35e-01 | 80.0% | 57.3% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.64 | 49.0 | 4.34e-01 | 87.3% | 79.3% |
| 2h09A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.64 | 47.0 | 4.73e-01 | 87.3% | 78.6% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 53.0 | 4.74e-01 | 100.0% | 82.4% |
| 2b2hA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.64 | 54.0 | 3.31e-01 | 100.0% | 29.9% |
| 5ts9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.64 | 53.0 | 3.80e-01 | 92.7% | 47.8% |
| 1cukA03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.64 | 50.0 | 5.23e-01 | 90.9% | 100.0% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.64 | 48.0 | 4.22e-01 | 87.3% | 76.9% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 50.0 | 4.27e-01 | 85.5% | 58.6% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.63 | 45.0 | 3.01e-01 | 87.3% | 18.0% |
| 2nsaA00 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.63 | 45.0 | 3.26e-01 | 76.4% | 35.9% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.62 | 48.0 | 4.23e-01 | 89.1% | 77.5% |
| 2a19A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.61 | 47.0 | 4.17e-01 | 87.3% | 82.4% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 54.0 | 4.27e-01 | 100.0% | 73.5% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 47.0 | 4.45e-01 | 87.3% | 79.4% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.61 | 51.0 | 4.47e-01 | 92.7% | 71.6% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 48.0 | 3.70e-01 | 87.3% | 85.3% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 49.0 | 4.40e-01 | 100.0% | 84.1% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 49.0 | 4.27e-01 | 100.0% | 88.5% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 47.0 | 3.88e-01 | 90.9% | 77.7% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 52.0 | 4.17e-01 | 100.0% | 72.8% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.60 | 40.0 | 4.24e-01 | 70.9% | 100.0% |
| 4hdrA01 | 1.10.1610.10 | Mainly Alpha › Orthogonal Bundle › 5,6-Dimethylbenzimidazole Phosphoribosyltransferase; Chain: A; domain 1 › Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (CobT), small domain | 0.60 | 48.0 | 4.61e-01 | 92.7% | 81.2% |
| 4nleA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.59 | 45.0 | 4.08e-01 | 83.6% | 82.9% |
| 3bf5A01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 50.0 | 3.38e-01 | 100.0% | 97.9% |
| 1bt3A00 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.58 | 45.0 | 2.76e-01 | 83.6% | 30.7% |
| 3zgzA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.58 | 48.0 | 3.34e-01 | 90.9% | 53.7% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.57 | 43.0 | 3.83e-01 | 87.3% | 66.3% |
| 1mjtB01 | 3.90.340.10 | Alpha Beta › Alpha-Beta Complex › Nitric Oxide Synthase; Chain A, domain 1 › Nitric Oxide Synthase; Chain A, domain 1 | 0.57 | 44.0 | 3.52e-01 | 90.9% | 38.8% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.57 | 43.0 | 3.83e-01 | 81.8% | 65.4% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 50.0 | 4.43e-01 | 100.0% | 75.9% |
| 1fkaD01 | 1.10.1050.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › Ribosomal protein S4/S9, N-terminal domain | 0.57 | 39.0 | 3.78e-01 | 74.5% | 61.2% |
| 5c0yA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.56 | 46.0 | 4.06e-01 | 100.0% | 74.2% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.56 | 45.0 | 3.97e-01 | 94.5% | 83.1% |
| 2ef1A01 | 1.20.82.10 | Mainly Alpha › Up-down Bundle › ADP Ribosyl Cyclase; Chain A, domain 1 › ADP Ribosyl Cyclase; Chain A, domain 1 | 0.55 | 43.0 | 3.33e-01 | 87.3% | 83.6% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.55 | 43.0 | 3.42e-01 | 89.1% | 48.8% |
| 2hlyA00 | 3.10.550.10 | Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 | 0.55 | 44.0 | 3.09e-01 | 94.5% | 87.8% |
| 1yeyA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.54 | 44.0 | 2.85e-01 | 96.4% | 82.0% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.52 | 35.0 | 3.47e-01 | 70.9% | 66.1% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 40.0 | 3.17e-01 | 92.7% | 85.5% |
| 1reqA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.51 | 45.0 | 3.24e-01 | 100.0% | 70.7% |
| 2fzlA02 | 6.10.140.1180 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 36.0 | 3.53e-01 | 76.4% | 100.0% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 41.0 | 3.54e-01 | 94.5% | 97.8% |
| 3cymA03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.50 | 40.0 | 3.58e-01 | 98.2% | 92.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3473995 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 63.0 | 6.00e-01 | 92.7% | 83.1% |
| 4961802 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 65.0 | 6.14e-01 | 100.0% | 84.6% |
| 3951854 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.73 | 57.0 | 5.59e-01 | 87.3% | 85.0% |
| 3989900 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.71 | 59.0 | 4.27e-01 | 92.7% | 63.1% |
| 4964973 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.71 | 54.0 | 5.86e-01 | 89.1% | 100.0% |
| 3959245 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.69 | 50.0 | 4.43e-01 | 80.0% | 56.5% |
| 3603383 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 59.0 | 5.63e-01 | 100.0% | 86.2% |
| 4534032 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.67 | 53.0 | 5.23e-01 | 89.1% | 80.0% |
| 3278934 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.67 | 49.0 | 4.85e-01 | 81.8% | 85.0% |
| 4420370 | 7510.1.1.2 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › PTA_PTB | 0.67 | 56.0 | 3.95e-01 | 94.5% | 42.3% |
| 4562844 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.67 | 52.0 | 5.24e-01 | 94.5% | 87.3% |
| 3383276 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 57.0 | 4.80e-01 | 98.2% | 82.1% |
| 4890756 | 102.1.1.120 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Spt6_S1 | 0.66 | 53.0 | 4.51e-01 | 90.9% | 79.8% |
| 5027041 | 102.3.1.0 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain | 0.64 | 48.0 | 4.34e-01 | 87.3% | 78.8% |
| 3961104 | 620.1.1.5 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › MDMPI_N | 0.63 | 46.0 | 3.63e-01 | 81.8% | 43.8% |
| 3480965 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 43.0 | 3.65e-01 | 80.0% | 43.2% |
| 5001813 | 5049.1.3.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Na(+)-translocating NADH-quinone reductase subunit B › NQR2_RnfD_RnfE | 0.61 | 51.0 | 3.33e-01 | 100.0% | 34.7% |
| 3737617 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 49.0 | 4.79e-01 | 98.2% | 81.7% |
| 3758209 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.61 | 42.0 | 4.17e-01 | 90.9% | 65.0% |
| 4433435 | 131.1.1.13 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_5 | 0.61 | 55.0 | 3.80e-01 | 100.0% | 93.9% |
| 4207710 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.61 | 51.0 | 5.08e-01 | 100.0% | 94.8% |
| 5056423 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.61 | 46.0 | 4.11e-01 | 87.3% | 80.0% |
| 3582614 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 53.0 | 3.97e-01 | 100.0% | 58.6% |
| 3185127 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 41.0 | 3.90e-01 | 70.9% | 61.5% |
| 4012435 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.60 | 47.0 | 3.49e-01 | 90.9% | 91.9% |
| 4980419 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.60 | 46.0 | 4.05e-01 | 85.5% | 60.0% |
| 3517742 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.60 | 50.0 | 3.39e-01 | 98.2% | 65.8% |
| 4019554 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 46.0 | 3.45e-01 | 89.1% | 76.8% |
| 3254341 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.58 | 42.0 | 2.76e-01 | 80.0% | 22.3% |
| 5006371 | 4049.1.1.0 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like | 0.58 | 45.0 | 4.49e-01 | 94.5% | 98.3% |
| 5001752 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.57 | 45.0 | 3.08e-01 | 90.9% | 30.9% |
| 5057377 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.56 | 40.0 | 3.23e-01 | 76.4% | 50.4% |
| 3963261 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.56 | 41.0 | 2.76e-01 | 85.5% | 21.2% |
| 4621446 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.54 | 45.0 | 2.82e-01 | 100.0% | 39.4% |
| 4942922 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 43.0 | 2.97e-01 | 100.0% | 63.4% |
| 3800965 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 43.0 | 3.53e-01 | 100.0% | 91.7% |
| 5055779 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.52 | 45.0 | 2.75e-01 | 100.0% | 55.4% |
| 3716063 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.52 | 42.0 | 3.17e-01 | 90.9% | 43.4% |
| 3190701 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.51 | 41.0 | 3.75e-01 | 96.4% | 93.8% |
| 1196998 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.51 | 38.0 | 3.44e-01 | 83.6% | 96.2% |
D3
medium
residues 251-342
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nxpB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.58 | 42.0 | 3.65e-01 | 77.2% | 65.5% |
| 3on3B00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.57 | 44.0 | 3.66e-01 | 84.8% | 94.9% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.54 | 46.0 | 4.06e-01 | 96.7% | 92.2% |
| 1ichA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 39.0 | 3.98e-01 | 77.2% | 89.7% |
| 2pbxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 37.0 | 3.01e-01 | 79.3% | 39.6% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 33.0 | 3.55e-01 | 78.3% | 79.2% |
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.50 | 35.0 | 2.71e-01 | 72.8% | 48.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4513616 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.62 | 44.0 | 3.93e-01 | 73.9% | 90.0% |
| 4982026 | 150.1.1.209 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF7121 | 0.57 | 39.0 | 3.44e-01 | 70.7% | 67.1% |
| 3998888 | 3562.1.1.7 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › ERMP1-TM | 0.53 | 47.0 | 3.90e-01 | 100.0% | 79.4% |
| 1723211 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.50 | 39.0 | 3.96e-01 | 82.6% | 87.9% |
D4
medium
residues 815-919
D5
medium
residues 978-1082
D6
medium
residues 1083-1113_1177-1260