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IMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_24056_24820
Arc-VirIMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_24056_24820
Identity
- Kingdom:
- archaea
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 97-169
Domain cluster:
rep: IMGVR_UViG_3300017642_000002-3300017642-Ga0183098_1071013__D184-256
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.78 | 63.0 | 5.87e-01 | 100.0% | 71.1% |
| 1a3wB03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.68 | 61.0 | 5.58e-01 | 100.0% | 90.7% |
| 4beuA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.67 | 60.0 | 4.53e-01 | 100.0% | 50.3% |
| 5yycA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.66 | 59.0 | 4.82e-01 | 100.0% | 65.2% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.64 | 57.0 | 4.40e-01 | 100.0% | 52.8% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.62 | 54.0 | 5.22e-01 | 100.0% | 85.7% |
| 3laeA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.59 | 42.0 | 4.08e-01 | 75.3% | 80.2% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.56 | 46.0 | 4.54e-01 | 100.0% | 88.7% |
| 3bnwB00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.55 | 46.0 | 3.77e-01 | 100.0% | 60.5% |
| 2y7lA01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 42.0 | 3.46e-01 | 97.3% | 50.9% |
| 5d2lE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.72e-01 | 93.2% | 93.5% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.51 | 42.0 | 3.45e-01 | 100.0% | 95.5% |
| 2ehbD00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 37.0 | 3.23e-01 | 82.2% | 71.4% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.50 | 42.0 | 3.98e-01 | 100.0% | 95.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965861 | 1.1.7.129 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Rcc01698_C | 0.82 | 75.0 | 6.97e-01 | 100.0% | 100.0% |
| 3292420 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.79 | 64.0 | 5.98e-01 | 100.0% | 71.1% |
| 3973553 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.79 | 64.0 | 6.51e-01 | 100.0% | 91.4% |
| 4047241 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 64.0 | 5.82e-01 | 100.0% | 67.4% |
| 4854958 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.78 | 63.0 | 5.76e-01 | 100.0% | 66.7% |
| 3291083 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.77 | 71.0 | 6.56e-01 | 100.0% | 91.1% |
| 4128405 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 61.0 | 6.20e-01 | 100.0% | 90.0% |
| 4204303 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 61.0 | 5.70e-01 | 100.0% | 71.1% |
| 4526316 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 62.0 | 5.72e-01 | 100.0% | 69.5% |
| 3699517 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.75 | 67.0 | 5.60e-01 | 100.0% | 77.6% |
| 4163711 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 61.0 | 5.86e-01 | 100.0% | 76.5% |
| 4316004 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 62.0 | 5.91e-01 | 100.0% | 77.6% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 60.0 | 5.98e-01 | 100.0% | 90.7% |
| 5015359 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.70 | 63.0 | 6.02e-01 | 100.0% | 89.4% |
| 4939469 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.70 | 63.0 | 5.77e-01 | 100.0% | 85.3% |
| 5064404 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 49.0 | 5.34e-01 | 83.6% | 93.3% |
| 4157526 | 1.1.12.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth | 0.65 | 54.0 | 4.75e-01 | 94.5% | 61.7% |
| 3988584 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.61 | 38.0 | 3.50e-01 | 100.0% | 47.0% |
| 3267060 | 11.1.1.820 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd | 0.60 | 49.0 | 4.77e-01 | 100.0% | 85.0% |
| 5015718 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 50.0 | 4.88e-01 | 100.0% | 85.5% |
| 3289363 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.57 | 43.0 | 4.68e-01 | 94.5% | 100.0% |
| 3703071 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 40.0 | 3.84e-01 | 82.2% | 77.6% |
| 3303363 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 40.0 | 2.97e-01 | 83.6% | 74.3% |
| 3325701 | 12.3.1.62 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Raffinose_syn, GHMP_kinases_C | 0.52 | 42.0 | 3.32e-01 | 97.3% | 59.5% |
| 3962219 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 39.0 | 2.84e-01 | 83.6% | 29.8% |
| 3439471 | 12.3.1.41 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Raffinose_syn | 0.51 | 42.0 | 3.27e-01 | 97.3% | 60.5% |
| 5025771 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.46e-01 | 78.1% | 84.2% |
| 4094888 | 12.3.1.41 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Raffinose_syn | 0.51 | 42.0 | 3.29e-01 | 100.0% | 58.4% |
| 3714597 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.51 | 38.0 | 3.06e-01 | 79.5% | 54.0% |
D2
medium
residues 37-49_65-95_172-224
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jxoA00 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.50 | 31.0 | 3.35e-01 | 100.0% | 72.6% |