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IMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_46117_46419
Arc-VirIMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_46117_46419
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
Domain cluster:
rep: IMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_65785_66012__D2-68
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.81 | 61.0 | 6.63e-01 | 96.8% | 93.7% |
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.64 | 54.0 | 4.69e-01 | 96.8% | 60.3% |
| 2ar1A00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.62 | 54.0 | 4.61e-01 | 96.8% | 63.7% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.62 | 51.0 | 4.04e-01 | 100.0% | 43.6% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.61 | 55.0 | 4.66e-01 | 100.0% | 82.1% |
| 3psqB00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.61 | 54.0 | 4.38e-01 | 100.0% | 87.4% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 37.0 | 3.74e-01 | 82.1% | 62.5% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.59 | 52.0 | 4.13e-01 | 100.0% | 78.4% |
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.58 | 48.0 | 3.81e-01 | 89.5% | 45.4% |
| 5k9aA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.57 | 51.0 | 3.94e-01 | 100.0% | 56.7% |
| 3iabB01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.56 | 44.0 | 4.39e-01 | 100.0% | 82.8% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 39.0 | 3.85e-01 | 82.1% | 69.6% |
| 3tmaA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 35.0 | 2.90e-01 | 100.0% | 33.9% |
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 41.0 | 2.73e-01 | 82.1% | 61.7% |
| 2g3aA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 38.0 | 3.73e-01 | 100.0% | 68.6% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.52 | 33.0 | 3.59e-01 | 86.3% | 81.1% |
| 1ym5A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 37.0 | 3.15e-01 | 100.0% | 45.6% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.51 | 40.0 | 3.73e-01 | 85.3% | 89.5% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 37.0 | 3.65e-01 | 100.0% | 71.4% |
| 4upiA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.50 | 37.0 | 2.41e-01 | 80.0% | 78.0% |
| 2m71A00 | 3.30.110.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Translation initiation factor 3 (IF-3), C-terminal domain | 0.50 | 36.0 | 3.60e-01 | 100.0% | 73.5% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 76.0 | 7.87e-01 | 100.0% | 98.9% |
| 5083501 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 73.0 | 7.50e-01 | 95.8% | 95.6% |
| 373012 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.81 | 60.0 | 6.57e-01 | 96.8% | 92.5% |
| 4180783 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.81 | 63.0 | 6.49e-01 | 95.8% | 85.6% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.69 | 63.0 | 5.44e-01 | 97.9% | 82.1% |
| 3369437 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.69 | 57.0 | 4.13e-01 | 95.8% | 33.6% |
| 3970827 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 55.0 | 5.82e-01 | 100.0% | 96.5% |
| 4444321 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.68 | 54.0 | 4.15e-01 | 95.8% | 37.7% |
| 4981806 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.65 | 59.0 | 5.24e-01 | 100.0% | 76.3% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.64 | 53.0 | 5.44e-01 | 100.0% | 94.4% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 53.0 | 5.42e-01 | 100.0% | 94.4% |
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.64 | 52.0 | 5.29e-01 | 100.0% | 89.5% |
| 3966280 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 52.0 | 5.25e-01 | 100.0% | 89.5% |
| 3805401 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.63 | 52.0 | 3.91e-01 | 96.8% | 35.9% |
| 4964155 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.62 | 55.0 | 4.88e-01 | 100.0% | 74.3% |
| 4949262 | 1.1.9.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3427 | 0.61 | 53.0 | 3.99e-01 | 100.0% | 43.2% |
| 4890596 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.60 | 42.0 | 4.26e-01 | 81.1% | 72.9% |
| 3978573 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.59 | 54.0 | 5.21e-01 | 100.0% | 92.4% |
| 3945442 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.58 | 48.0 | 3.75e-01 | 89.5% | 45.4% |
| 3546177 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.56 | 43.0 | 3.30e-01 | 100.0% | 33.6% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 50.0 | 4.84e-01 | 100.0% | 93.3% |
| 4512383 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 42.0 | 4.15e-01 | 100.0% | 76.0% |
| 4397425 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 41.0 | 3.97e-01 | 80.0% | 74.3% |
| 4996084 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 39.0 | 3.36e-01 | 100.0% | 46.7% |
| 4961940 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.54 | 39.0 | 3.83e-01 | 98.9% | 68.6% |
| 4968256 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 39.0 | 3.55e-01 | 77.9% | 77.8% |
| 3203184 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.54 | 35.0 | 3.25e-01 | 81.1% | 52.5% |
| 3462526 | 2492.1.1.11 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NPL4 | 0.53 | 46.0 | 3.67e-01 | 100.0% | 81.4% |
| 3614493 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 43.0 | 3.07e-01 | 88.4% | 49.3% |
| 4035993 | 2008.1.1.172 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26318 | 0.53 | 44.0 | 3.43e-01 | 92.6% | 43.3% |
| 3703879 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.53 | 47.0 | 3.69e-01 | 100.0% | 61.0% |
| 4996349 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 38.0 | 3.27e-01 | 100.0% | 47.1% |
| 182718 | 2008.1.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Viral_alk_exo | 0.52 | 42.0 | 2.80e-01 | 90.5% | 50.8% |
| 3589960 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 39.0 | 3.28e-01 | 100.0% | 47.5% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 38.0 | 2.44e-01 | 77.9% | 22.2% |
| 3992487 | 11.1.1.1178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DB, Ig_3 | 0.51 | 38.0 | 2.73e-01 | 100.0% | 24.8% |