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IMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_65785_66012
Arc-VirIMGVR_UViG_3300042270_000132-3300042270-Ga0451653_000639_65785_66012
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-68
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rcjA01 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.69 | 58.0 | 4.54e-01 | 94.0% | 43.2% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.65 | 59.0 | 4.03e-01 | 100.0% | 31.6% |
| 3npdA00 | 3.30.300.250 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.64 | 58.0 | 4.84e-01 | 100.0% | 62.8% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.62 | 48.0 | 4.27e-01 | 100.0% | 58.3% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.60 | 48.0 | 4.29e-01 | 100.0% | 62.6% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 53.0 | 4.69e-01 | 100.0% | 72.6% |
| 3u4qA06 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.57 | 49.0 | 3.47e-01 | 98.5% | 31.4% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 43.0 | 3.57e-01 | 100.0% | 45.2% |
| 4owpB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 50.0 | 3.72e-01 | 100.0% | 64.5% |
| 3ieyB00 | 3.40.1350.150 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 46.0 | 3.55e-01 | 100.0% | 42.1% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 48.0 | 3.48e-01 | 100.0% | 55.9% |
| 1liiA02 | 3.30.1110.10 | Alpha Beta › 2-Layer Sandwich › Adenosine kinase, small domain › | 0.53 | 43.0 | 4.45e-01 | 94.0% | 100.0% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.53 | 46.0 | 3.68e-01 | 100.0% | 48.6% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 45.0 | 3.93e-01 | 100.0% | 64.0% |
| 4xs9A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 37.0 | 2.88e-01 | 76.1% | 89.4% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 44.0 | 3.39e-01 | 100.0% | 41.1% |
| 7eqiA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 35.0 | 2.84e-01 | 76.1% | 90.2% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.50 | 40.0 | 3.03e-01 | 98.5% | 33.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938551 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.91 | 85.0 | 7.57e-01 | 100.0% | 75.6% |
| 3635966 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 62.0 | 5.11e-01 | 97.0% | 47.8% |
| 4932437 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.79 | 63.0 | 5.78e-01 | 92.5% | 67.1% |
| 4029756 | 1.1.9.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › YTH | 0.76 | 62.0 | 4.68e-01 | 94.0% | 37.5% |
| 424674 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.66 | 59.0 | 4.04e-01 | 100.0% | 31.0% |
| 119502 | 3148.1.1.1 ↗ | a+b two layers › putative secreted protein PA3611 › putative secreted protein PA3611 › putative secreted protein PA3611 › QSregVF | 0.64 | 58.0 | 4.86e-01 | 100.0% | 63.4% |
| 5012280 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.61 | 54.0 | 3.81e-01 | 100.0% | 37.1% |
| 4015596 | 3873.1.1.0 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain | 0.59 | 50.0 | 4.17e-01 | 95.5% | 70.0% |
| 4060254 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.59 | 52.0 | 3.52e-01 | 100.0% | 26.8% |
| 3179675 | 3873.1.1.1 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › HGTP_anticodon2 | 0.59 | 50.0 | 4.14e-01 | 95.5% | 70.8% |
| 5057963 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.58 | 52.0 | 4.02e-01 | 100.0% | 70.3% |
| 4001890 | 3873.1.1.0 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain | 0.55 | 47.0 | 3.94e-01 | 98.5% | 98.4% |
| 4015105 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.55 | 49.0 | 3.90e-01 | 100.0% | 69.6% |
| 3615458 | 152.1.1.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 | 0.54 | 45.0 | 4.01e-01 | 92.5% | 94.7% |
| 3264880 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.54 | 36.0 | 2.53e-01 | 71.6% | 32.3% |
| 1288520 | 3873.1.1.0 ↗ | a+b two layers › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain › Serine/threonine-protein kinase GCN2 C-terminal domain | 0.53 | 45.0 | 3.75e-01 | 95.5% | 62.6% |
| 4352045 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 36.0 | 3.26e-01 | 70.1% | 94.4% |
| 3625561 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.53 | 44.0 | 3.91e-01 | 100.0% | 63.0% |
| 4981995 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 43.0 | 3.38e-01 | 98.5% | 66.9% |
| 4956652 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.52 | 42.0 | 3.81e-01 | 100.0% | 65.6% |
| 4965650 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.51 | 44.0 | 3.52e-01 | 98.5% | 64.3% |
| 3501616 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.51 | 46.0 | 4.08e-01 | 100.0% | 69.5% |
| 3797963 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.51 | 44.0 | 3.26e-01 | 100.0% | 61.4% |
| 3368873 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.51 | 43.0 | 3.53e-01 | 100.0% | 51.2% |
| 3594483 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.51 | 38.0 | 3.08e-01 | 83.6% | 55.0% |
| 4022567 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 38.0 | 3.06e-01 | 82.1% | 51.9% |