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IMGVR_UViG_3300042275_000699-3300042275-Ga0451658_020444_369_575
Arc-VirIMGVR_UViG_3300042275_000699-3300042275-Ga0451658_020444_369_575
Identity
- Kingdom:
- archaea
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-61
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vziA01 | 2.20.28.100 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Desulphoferrodoxin, N-terminal domain | 0.73 | 47.0 | 5.25e-01 | 70.0% | 89.5% |
| 1dfxA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.70 | 50.0 | 3.70e-01 | 76.0% | 30.4% |
| 2apoB00 | 2.20.28.40 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › H/ACA ribonucleoprotein complex, subunit Nop10 | 0.64 | 52.0 | 5.11e-01 | 100.0% | 81.8% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 42.0 | 4.28e-01 | 74.0% | 89.4% |
| 4b7hA01 | 4.10.91.20 | Few Secondary Structures › Irregular › Cytochrome C Oxidase; Chain J › | 0.60 | 35.0 | 3.24e-01 | 96.0% | 42.9% |
| 2lxwA00 | 6.10.250.1730 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 38.0 | 3.72e-01 | 94.0% | 61.8% |
| 1wjpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.56 | 32.0 | 3.72e-01 | 88.0% | 90.3% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.56 | 41.0 | 4.04e-01 | 94.0% | 73.7% |
| 1l5aA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 46.0 | 3.07e-01 | 100.0% | 75.9% |
| 1u7pD00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 38.0 | 2.85e-01 | 88.0% | 95.7% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971115 | 2002.4.1.2 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › QRPTase_C | 0.86 | 57.0 | 3.46e-01 | 70.0% | 11.9% |
| 4943704 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.83 | 56.0 | 5.12e-01 | 70.0% | 55.4% |
| 5044566 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.81 | 55.0 | 4.84e-01 | 70.0% | 50.0% |
| 4518520 | 375.1.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Desulforedoxin | 0.76 | 50.0 | 5.73e-01 | 70.0% | 97.1% |
| 5044292 | 375.11.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ | 0.75 | 57.0 | 5.22e-01 | 82.0% | 73.8% |
| 4952915 | 375.2.1.0 ↗ | few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like | 0.74 | 47.0 | 5.45e-01 | 70.0% | 94.3% |
| 3440046 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 50.0 | 5.46e-01 | 74.0% | 92.5% |
| 5013997 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 53.0 | 5.54e-01 | 88.0% | 93.3% |
| 5022651 | 375.11.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ | 0.69 | 53.0 | 4.72e-01 | 82.0% | 68.6% |
| 3460548 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.68 | 44.0 | 2.78e-01 | 100.0% | 12.6% |
| 4221969 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.66 | 47.0 | 3.65e-01 | 76.0% | 36.4% |
| 3227441 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.63 | 42.0 | 4.04e-01 | 70.0% | 70.0% |
| 4979347 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.63 | 42.0 | 3.90e-01 | 72.0% | 52.9% |
| 3566936 | 376.1.4.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 | 0.62 | 42.0 | 3.97e-01 | 78.0% | 55.4% |
| 8105 | 376.1.6.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR_1 | 0.61 | 44.0 | 3.95e-01 | 78.0% | 64.4% |
| 3453672 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.60 | 42.0 | 3.86e-01 | 74.0% | 87.7% |
| 3476123 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 37.0 | 4.24e-01 | 100.0% | 97.1% |
| 2721320 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.56 | 36.0 | 3.73e-01 | 96.0% | 71.1% |
| 4942573 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 37.0 | 3.53e-01 | 74.0% | 58.3% |
| 4927501 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.55 | 44.0 | 2.65e-01 | 94.0% | 12.3% |
| 5057952 | 375.1.1.325 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › OapC | 0.54 | 43.0 | 4.07e-01 | 94.0% | 78.5% |
| 2631980 | 3696.1.1.2 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD | 0.54 | 40.0 | 3.55e-01 | 94.0% | 54.5% |
| 5060014 | 7527.1.1.2 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › CoA_transf_3 | 0.51 | 40.0 | 2.37e-01 | 98.0% | 11.5% |
| 4932321 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.51 | 42.0 | 2.53e-01 | 94.0% | 13.1% |