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IMGVR_UViG_3300042275_000699-3300042275-Ga0451658_020444_3706_3984

Arc-Vir

IMGVR_UViG_3300042275_000699-3300042275-Ga0451658_020444_3706_3984

Quality

93.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-88
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 5.48e-01 85.4% 98.4%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.48e-01 81.7% 100.0%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 5.11e-01 85.4% 88.9%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.82e-01 81.7% 77.6%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.95e-01 81.7% 87.2%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 5.01e-01 85.4% 98.4%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.60e-01 80.5% 79.8%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 4.52e-01 85.4% 68.9%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.53e-01 85.4% 70.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.14e-01 80.5% 62.4%
3f6oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 4.12e-01 78.0% 65.9%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.42e-01 76.8% 76.8%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 3.86e-01 81.7% 53.0%
3fx3B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.24e-01 80.5% 67.4%
3fxtA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.92e-01 84.1% 65.6%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.58 44.0 3.91e-01 82.9% 75.4%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.16e-01 81.7% 71.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.07e-01 85.4% 66.0%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.10e-01 89.0% 69.9%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 36.0 3.47e-01 70.7% 52.5%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.72e-01 84.1% 56.7%
1jo0A00 3.30.110.60 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › YhbY-like 0.56 39.0 3.71e-01 79.3% 60.8%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.89e-01 80.5% 67.8%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.52e-01 89.0% 86.2%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 47.0 4.39e-01 95.1% 90.3%
2gqcA01 3.30.70.2080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 36.0 4.09e-01 75.6% 94.6%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 4.07e-01 86.6% 70.5%
7fbhB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 40.0 2.93e-01 78.0% 39.1%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 4.09e-01 85.4% 73.4%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 4.19e-01 82.9% 90.1%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 4.02e-01 82.9% 73.1%
1u7lA01 3.30.70.1180 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Vacuolar atp synthase subunit c; domain 1 0.53 38.0 3.77e-01 79.3% 84.6%
2cxaA01 3.30.70.3550 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain 0.52 32.0 3.56e-01 78.0% 83.3%
2oh1C00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 36.0 2.87e-01 84.1% 34.9%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 4.04e-01 92.7% 80.8%
6swc801 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.51 36.0 3.23e-01 79.3% 51.7%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002459 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.98 85.0 8.96e-01 90.2% 97.3%
5017952 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.97 86.0 9.04e-01 95.1% 100.0%
3770447 101.1.2.606 alpha arrays › HTH › HTH › winged helix domain › RPC5_C 0.74 59.0 5.77e-01 85.4% 93.3%
3262891 101.1.2.79 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 0.73 53.0 5.81e-01 85.4% 95.4%
3954610 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 6.09e-01 97.6% 100.0%
4676441 101.1.2.785 alpha arrays › HTH › HTH › winged helix domain › HTH_13 0.69 48.0 5.13e-01 86.6% 84.3%
3571824 101.1.2.601 alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH 0.69 53.0 3.93e-01 85.4% 31.6%
4031678 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.69 52.0 5.73e-01 85.4% 100.0%
3773922 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.68 53.0 4.37e-01 86.6% 46.0%
4950213 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 5.26e-01 91.5% 74.0%
4188749 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.67 51.0 5.16e-01 86.6% 81.2%
3468855 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 57.0 4.70e-01 96.3% 83.9%
None 0.66 51.0 4.73e-01 86.6% 64.8%
3597278 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 5.02e-01 86.6% 76.7%
3291502 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.66 45.0 5.16e-01 73.2% 96.7%
3403298 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.33e-01 86.6% 49.0%
4991685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.88e-01 90.2% 81.8%
4997247 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.65 49.0 5.10e-01 81.7% 97.3%
4973290 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.43e-01 87.8% 100.0%
5037932 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 49.0 4.76e-01 86.6% 71.3%
4993096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 46.0 4.72e-01 81.7% 77.5%
4344708 101.1.2.311 alpha arrays › HTH › HTH › winged helix domain › RNA12 0.65 47.0 4.48e-01 85.4% 66.3%
4321934 101.1.2.311 alpha arrays › HTH › HTH › winged helix domain › RNA12 0.64 46.0 3.78e-01 85.4% 39.4%
3306699 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.64 49.0 3.17e-01 82.9% 19.6%
3201844 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.64 51.0 4.70e-01 86.6% 69.5%
3439642 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 54.0 4.61e-01 96.3% 85.0%
3681620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 55.0 4.73e-01 96.3% 83.8%
3621333 101.1.2.676 alpha arrays › HTH › HTH › winged helix domain › Mnd1, LZ3wCH 0.64 47.0 3.57e-01 78.0% 33.8%
5081614 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 45.0 4.54e-01 81.7% 72.9%
5079818 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.67e-01 85.4% 73.3%
4957231 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 45.0 4.34e-01 80.5% 65.3%
3458999 101.1.2.73 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.63 48.0 4.62e-01 82.9% 75.8%
4998543 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 4.94e-01 96.3% 85.5%
3463151 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 4.31e-01 91.5% 76.6%
138903 101.1.2.232 alpha arrays › HTH › HTH › winged helix domain › MLPTv-like_HTH 0.62 43.0 3.78e-01 81.7% 48.4%
4306767 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 54.0 3.29e-01 100.0% 89.1%
4020975 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.44e-01 85.4% 70.5%
4982868 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.93e-01 89.0% 88.2%
4023459 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.84e-01 85.4% 87.5%
4965618 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 4.25e-01 85.4% 65.0%
2601 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.60 44.0 4.42e-01 76.8% 76.8%
3303379 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.60 42.0 4.09e-01 79.3% 65.6%
4986510 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 48.0 4.00e-01 89.0% 50.7%
3313157 101.1.2.524 alpha arrays › HTH › HTH › winged helix domain › DUF7625 0.60 46.0 4.76e-01 82.9% 100.0%
4984731 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 4.04e-01 80.5% 62.0%
5026287 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.60 43.0 4.14e-01 81.7% 66.3%
5042271 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 4.01e-01 80.5% 62.0%
5082317 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.59 43.0 4.23e-01 82.9% 71.1%
3434870 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.59 45.0 4.57e-01 81.7% 95.0%
3588315 328.4.1.1 a+b two layers › IF3-like › YhbY-like › YhbY-like › CRS1_YhbY 0.59 41.0 3.89e-01 80.5% 60.0%
4979509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 46.0 4.44e-01 86.6% 80.0%
3304324 101.1.2.106 alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 0.58 47.0 4.06e-01 91.5% 83.7%
5036162 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 41.0 3.74e-01 80.5% 56.4%
3613028 320.4.1.3 a+b two layers › R3H domain-like › PUB domain › PUB domain › PUB 0.57 43.0 3.96e-01 84.1% 63.5%
3822416 101.1.2.7 alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind 0.57 42.0 3.91e-01 79.3% 80.0%
3821198 101.1.2.106 alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 0.57 46.0 3.75e-01 89.0% 92.3%
4527970 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.56 49.0 3.68e-01 96.3% 52.0%
5065664 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.56 39.0 3.44e-01 81.7% 47.6%
4962040 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 49.0 4.14e-01 100.0% 90.7%
4142054 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.55 39.0 3.50e-01 80.5% 50.4%
3688260 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.55 40.0 3.70e-01 78.0% 77.1%
4962916 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 44.0 3.37e-01 86.6% 84.9%
4948233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 4.29e-01 91.5% 81.1%
4992529 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 4.32e-01 91.5% 87.8%
3815874 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.53 44.0 3.42e-01 96.3% 91.9%
4990677 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 44.0 4.38e-01 91.5% 90.6%
4999099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 4.06e-01 91.5% 74.8%
5031317 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.67e-01 86.6% 63.3%
3178027 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.52 40.0 2.77e-01 85.4% 54.2%
3942666 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 41.0 3.93e-01 87.8% 77.6%
5033846 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 44.0 3.97e-01 96.3% 93.0%
4101744 375.1.1.46 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g 0.51 44.0 2.86e-01 97.6% 73.5%
4125793 2005.1.1.40 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g 0.51 44.0 2.74e-01 97.6% 77.1%
4456406 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.50 42.0 4.03e-01 95.1% 92.6%
5074009 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.50 43.0 3.35e-01 98.8% 90.3%