←Back to structures
IMGVR_UViG_3300042768_000004-3300042768-Ga0482236_000101_499_1185
Arc-VirIMGVR_UViG_3300042768_000004-3300042768-Ga0482236_000101_499_1185
Identity
- Kingdom:
- archaea
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 46-226
Domain cluster:
representative
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00353.26 best | HemolysinCabind | 22.4 | 1.30e-04 | 19.9% | 97.2% |
| PF00353.26 | HemolysinCabind | 30.1 | 5.10e-07 | 19.9% | 100.0% |
| PF00353.26 | HemolysinCabind | 35.0 | 1.50e-08 | 19.9% | 97.2% |
| PF00353.26 | HemolysinCabind | 17.0 | 6.70e-03 | 17.1% | 75.0% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p4gD00 | 2.160.20.160 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.92 | 89.0 | 7.18e-01 | 100.0% | 65.4% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.85 | 81.0 | 5.72e-01 | 100.0% | 64.9% |
| 2inuA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 79.0 | 5.97e-01 | 100.0% | 79.4% |
| 3vsvA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 79.0 | 5.57e-01 | 100.0% | 57.3% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.82 | 77.0 | 5.38e-01 | 100.0% | 60.6% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 76.0 | 5.82e-01 | 100.0% | 82.7% |
| 1bheA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 76.0 | 5.87e-01 | 100.0% | 83.2% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 76.0 | 5.37e-01 | 100.0% | 54.6% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 63.0 | 6.13e-01 | 80.7% | 100.0% |
| 1ru4A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 75.0 | 5.72e-01 | 100.0% | 73.5% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.80 | 75.0 | 5.04e-01 | 100.0% | 51.3% |
| 1k5cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.80 | 74.0 | 6.00e-01 | 100.0% | 87.1% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.78 | 73.0 | 6.53e-01 | 100.0% | 94.3% |
| 4pmhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.78 | 67.0 | 5.25e-01 | 91.2% | 88.0% |
| 1gq8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 72.0 | 5.89e-01 | 100.0% | 88.1% |
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 72.0 | 5.71e-01 | 100.0% | 86.5% |
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 68.0 | 5.23e-01 | 95.6% | 86.1% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 59.0 | 5.07e-01 | 81.8% | 100.0% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 69.0 | 5.84e-01 | 100.0% | 90.0% |
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 66.0 | 5.30e-01 | 95.6% | 92.1% |
| 2w7zA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.74 | 66.0 | 6.36e-01 | 97.2% | 92.3% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 61.0 | 5.59e-01 | 87.8% | 100.0% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.68 | 62.0 | 6.10e-01 | 99.4% | 96.9% |
| 1af0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.67 | 58.0 | 5.26e-01 | 90.1% | 94.1% |
| 1gwbA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 58.0 | 5.10e-01 | 100.0% | 91.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928367 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.94 | 67.0 | 7.59e-01 | 72.4% | 90.3% |
| 3287148 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.94 | 91.0 | 8.18e-01 | 100.0% | 87.7% |
| 4514585 | 207.6.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind+RTX_C | 0.93 | 90.0 | 7.28e-01 | 100.0% | 74.5% |
| 4401143 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.93 | 91.0 | 7.84e-01 | 100.0% | 84.7% |
| 3502358 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.92 | 72.0 | 6.97e-01 | 100.0% | 73.4% |
| 4371237 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.90 | 87.0 | 7.43e-01 | 100.0% | 91.7% |
| 3798495 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.89 | 85.0 | 7.74e-01 | 100.0% | 88.3% |
| 4406918 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.89 | 62.0 | 7.32e-01 | 71.3% | 100.0% |
| 3926145 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.88 | 83.0 | 8.07e-01 | 97.8% | 100.0% |
| 4074921 | 207.6.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind,HCBP_related | 0.85 | 78.0 | 7.32e-01 | 93.9% | 93.8% |
| 4307386 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.84 | 73.0 | 7.26e-01 | 100.0% | 88.6% |
| 5055230 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.84 | 79.0 | 6.90e-01 | 100.0% | 78.8% |
| 5055378 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.83 | 79.0 | 6.11e-01 | 100.0% | 55.6% |
| 4416104 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.83 | 76.0 | 6.52e-01 | 93.4% | 97.7% |
| 4398996 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.83 | 59.0 | 6.73e-01 | 87.8% | 92.9% |
| 4944455 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.83 | 78.0 | 6.70e-01 | 99.4% | 93.0% |
| 3884314 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.81 | 76.0 | 5.98e-01 | 100.0% | 76.4% |
| 3869345 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.80 | 66.0 | 6.04e-01 | 84.5% | 96.9% |
| 4581394 | 207.6.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind,HCBP_related | 0.80 | 77.0 | 7.42e-01 | 99.4% | 100.0% |
| 3572753 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.78 | 73.0 | 4.96e-01 | 100.0% | 33.7% |
| 4520609 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.76 | 57.0 | 6.14e-01 | 76.8% | 100.0% |
| 3914295 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 65.0 | 6.62e-01 | 100.0% | 93.7% |
| 3436683 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.73 | 60.0 | 5.98e-01 | 99.4% | 82.5% |
| 3524015 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.71 | 65.0 | 5.46e-01 | 100.0% | 59.4% |
| 3778106 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 64.0 | 5.01e-01 | 97.2% | 68.3% |
| 4103288 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.69 | 60.0 | 6.28e-01 | 98.3% | 95.3% |
| 3666410 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.69 | 60.0 | 6.21e-01 | 98.3% | 100.0% |
| 4547981 | 207.6.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind+RTX_C | 0.69 | 58.0 | 5.57e-01 | 86.2% | 87.5% |
| 4497184 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.69 | 64.0 | 5.59e-01 | 100.0% | 80.0% |
| 4307839 | 207.6.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind,HCBP_related | 0.69 | 62.0 | 5.88e-01 | 92.8% | 99.5% |
| 3966623 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.68 | 57.0 | 5.26e-01 | 86.7% | 94.5% |
| 152575 | 207.6.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Peptidase_M10_C | 0.61 | 58.0 | 5.28e-01 | 99.4% | 99.6% |
| 1389214 | 207.6.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind | 0.52 | 46.0 | 4.66e-01 | 92.8% | 94.5% |