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IMGVR_UViG_3300042987_000739-3300042987-Ga0451684_0001607_732_983
Arc-VirIMGVR_UViG_3300042987_000739-3300042987-Ga0451684_0001607_732_983
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-79
Domain cluster:
rep: KJ410740.1__AHV82149.1__X__00024__D15-61
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1w36C04 | 1.10.486.10 | Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 | 0.66 | 47.0 | 3.22e-01 | 77.2% | 27.8% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.65 | 46.0 | 3.40e-01 | 73.7% | 48.3% |
| 1el4A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 54.0 | 3.81e-01 | 96.5% | 52.6% |
| 2cruA01 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.61 | 46.0 | 4.25e-01 | 84.2% | 80.5% |
| 2w3sB03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.57 | 43.0 | 3.78e-01 | 86.0% | 84.0% |
| 1h3mB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 47.0 | 3.27e-01 | 98.2% | 73.4% |
| 4uhwA09 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.56 | 43.0 | 3.72e-01 | 86.0% | 61.5% |
| 6fhoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 45.0 | 3.27e-01 | 98.2% | 85.7% |
| 3mxtA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.56 | 45.0 | 3.85e-01 | 94.7% | 97.0% |
| 1eg3A02 | 6.10.140.70 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 40.0 | 4.28e-01 | 82.5% | 91.8% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.53 | 42.0 | 3.15e-01 | 91.2% | 56.9% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.53 | 40.0 | 3.62e-01 | 93.0% | 89.4% |
| 1g71A02 | 1.10.8.160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA primase S; domain 2 | 0.53 | 42.0 | 3.56e-01 | 94.7% | 53.7% |
| 4b08A08 | 3.40.1820.20 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease H-like motif › B family DNA polymerase, thumb domain, alpha/beta motif | 0.52 | 34.0 | 3.06e-01 | 80.7% | 47.5% |
| 3v2lA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.52 | 41.0 | 3.47e-01 | 100.0% | 56.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3689894 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.87 | 80.0 | 6.62e-01 | 100.0% | 63.2% |
| 1388657 | 5000.3.1.3 ↗ | alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Poxv_Bcl-2-like | 0.67 | 49.0 | 3.68e-01 | 78.9% | 95.2% |
| 5052889 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.67 | 58.0 | 3.50e-01 | 96.5% | 19.5% |
| 2887752 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 46.0 | 4.27e-01 | 77.2% | 80.3% |
| 3589339 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.63 | 52.0 | 4.41e-01 | 93.0% | 97.9% |
| 5043797 | 3542.1.1.1 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin | 0.63 | 43.0 | 2.70e-01 | 71.9% | 57.8% |
| 4937019 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.62 | 52.0 | 4.49e-01 | 93.0% | 98.9% |
| 2323977 | 1198.1.1.0 ↗ | alpha bundles › BTA121 › BTA121 › BTA121 | 0.62 | 55.0 | 4.17e-01 | 100.0% | 72.1% |
| 3734783 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.60 | 47.0 | 2.91e-01 | 86.0% | 84.9% |
| 5025553 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.59 | 49.0 | 4.16e-01 | 96.5% | 71.0% |
| 3385046 | 7057.1.1.1 ↗ | alpha duplicates or obligate multimers › N-terminal head domain of protein delta › N-terminal head domain of protein delta › N-terminal head domain of protein delta › PMD | 0.58 | 46.0 | 3.94e-01 | 94.7% | 60.0% |
| 3839950 | 601.7.1.57 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_Apea | 0.57 | 48.0 | 3.84e-01 | 100.0% | 64.0% |
| 153141 | 108.2.1.1 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP | 0.52 | 41.0 | 3.47e-01 | 100.0% | 56.7% |