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IMGVR_UViG_3300042987_000805-3300042987-Ga0451684_0009601_1612_2262

Arc-Vir

IMGVR_UViG_3300042987_000805-3300042987-Ga0451684_0009601_1612_2262

Identity

Kingdom:
archaea

Quality

91.7 mean pLDDT

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-74
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 52.0 5.42e-01 83.8% 69.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.81 50.0 5.98e-01 81.1% 95.8%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 55.0 6.01e-01 83.8% 85.5%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.75 57.0 6.07e-01 83.8% 95.2%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 6.01e-01 83.8% 93.5%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.65e-01 81.1% 92.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 5.20e-01 85.1% 88.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 50.0 5.13e-01 86.5% 90.3%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 52.0 3.98e-01 91.9% 97.1%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 48.0 5.07e-01 82.4% 95.5%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 48.0 3.88e-01 89.2% 78.5%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 44.0 2.72e-01 79.7% 22.5%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.55 40.0 3.37e-01 78.4% 86.8%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 48.0 3.07e-01 95.9% 85.2%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 39.0 3.62e-01 77.0% 68.7%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 35.0 3.21e-01 85.1% 52.1%
1vwxB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 41.0 3.13e-01 85.1% 50.6%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 38.0 3.89e-01 87.8% 80.8%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 41.0 3.44e-01 86.5% 96.2%
2z84A00 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 41.0 3.05e-01 91.9% 90.5%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 38.0 3.96e-01 91.9% 92.4%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3741680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 60.0 6.83e-01 83.8% 96.4%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 57.0 5.93e-01 85.1% 78.6%
3486495 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 4.00e-01 81.1% 29.7%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 56.0 4.66e-01 83.8% 45.0%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 55.0 6.06e-01 83.8% 91.7%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.77 55.0 5.22e-01 83.8% 64.7%
3660358 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.70e-01 83.8% 88.3%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.71 55.0 5.87e-01 83.8% 95.4%
3938586 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.70 58.0 3.97e-01 90.5% 80.8%
4995669 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 56.0 5.65e-01 85.1% 100.0%
4271974 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.70 53.0 5.67e-01 85.1% 93.8%
3363360 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.68 45.0 4.32e-01 83.8% 58.8%
3660964 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.67 53.0 4.79e-01 85.1% 63.0%
1821014 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.67 52.0 5.54e-01 83.8% 96.9%
3451280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 52.0 4.02e-01 83.8% 58.1%
3215500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 5.06e-01 79.7% 94.5%
2664854 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.65 50.0 4.53e-01 85.1% 60.8%
4888987 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.64 50.0 5.21e-01 85.1% 91.3%
3698762 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.64 50.0 4.54e-01 86.5% 63.1%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.63 47.0 4.98e-01 85.1% 92.3%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.82e-01 89.2% 87.7%
4973274 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.61 42.0 4.76e-01 70.3% 94.5%
3526272 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.59 47.0 3.80e-01 89.2% 64.7%
3275677 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.57 47.0 3.72e-01 91.9% 68.1%
3438237 12.3.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.54 41.0 2.91e-01 82.4% 61.6%
3430637 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.54 43.0 2.86e-01 86.5% 78.1%
4888509 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 41.0 2.98e-01 85.1% 93.0%
D2 medium residues 75-185
PDB
Domain cluster: rep: ON014757.1__UQS95283.1__Pam5_67__00067__D90-187