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IMGVR_UViG_3300043295_000234-3300043295-Ga0439229_001754_2359_2913
Arc-VirIMGVR_UViG_3300043295_000234-3300043295-Ga0439229_001754_2359_2913
Identity
- Kingdom:
- archaea
Quality
72.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-110
Domain cluster:
rep: NC_029048.2__YP_009221738.1__PHICD211_20135__00153__D2-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13650.12 best | Asp_protease_2 | 24.7 | 4.30e-05 | 92.6% | 80.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.86 | 72.0 | 7.39e-01 | 92.6% | 91.3% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.83 | 73.0 | 7.20e-01 | 91.7% | 90.3% |
| 3slzA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 70.0 | 6.93e-01 | 100.0% | 88.6% |
| 2jysA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.79 | 62.0 | 6.76e-01 | 100.0% | 97.8% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.75 | 69.0 | 6.63e-01 | 97.2% | 94.2% |
| 1qs8A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.75 | 69.0 | 5.80e-01 | 100.0% | 88.0% |
| 3s8iA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.73 | 65.0 | 6.25e-01 | 100.0% | 83.9% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 31.0 | 3.38e-01 | 81.5% | 68.1% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933942 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.93 | 88.0 | 8.64e-01 | 100.0% | 92.2% |
| 4992338 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.91 | 83.0 | 8.51e-01 | 99.1% | 98.1% |
| 5031732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.91 | 86.0 | 8.44e-01 | 100.0% | 93.0% |
| 5031219 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.91 | 86.0 | 8.28e-01 | 99.1% | 99.2% |
| 4969974 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.90 | 81.0 | 7.62e-01 | 93.5% | 94.4% |
| 4955517 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.90 | 85.0 | 8.49e-01 | 99.1% | 97.3% |
| 4933116 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.90 | 84.0 | 8.22e-01 | 100.0% | 92.2% |
| 5031909 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.89 | 86.0 | 8.28e-01 | 100.0% | 91.5% |
| 4968533 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.89 | 78.0 | 7.66e-01 | 91.7% | 96.5% |
| 5030532 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.89 | 84.0 | 8.18e-01 | 99.1% | 92.2% |
| 4932925 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.89 | 84.0 | 8.04e-01 | 99.1% | 100.0% |
| 5032197 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.88 | 81.0 | 8.10e-01 | 99.1% | 94.5% |
| 4968321 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.88 | 72.0 | 7.29e-01 | 85.2% | 98.1% |
| 5032212 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.88 | 83.0 | 7.66e-01 | 100.0% | 91.7% |
| 5059503 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.87 | 83.0 | 7.52e-01 | 100.0% | 84.8% |
| 4984547 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.87 | 82.0 | 7.95e-01 | 100.0% | 95.8% |
| 3506527 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.86 | 72.0 | 7.54e-01 | 89.8% | 95.0% |
| 4993656 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.86 | 82.0 | 7.86e-01 | 100.0% | 95.0% |
| 4969842 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.86 | 82.0 | 8.00e-01 | 100.0% | 94.8% |
| 4 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.86 | 72.0 | 7.38e-01 | 92.6% | 91.3% |
| 5032263 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.86 | 81.0 | 7.55e-01 | 100.0% | 93.8% |
| 5030771 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.86 | 81.0 | 7.92e-01 | 100.0% | 93.0% |
| 5023444 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.86 | 80.0 | 8.01e-01 | 98.1% | 99.1% |
| 5032277 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.85 | 80.0 | 7.61e-01 | 100.0% | 88.8% |
| 5031038 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.85 | 80.0 | 7.57e-01 | 100.0% | 96.0% |
| 4969351 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.85 | 78.0 | 7.66e-01 | 97.2% | 96.5% |
| 4928555 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 80.0 | 7.58e-01 | 100.0% | 91.1% |
| 4964766 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.84 | 77.0 | 7.71e-01 | 97.2% | 94.5% |
| 5029170 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.84 | 79.0 | 7.33e-01 | 100.0% | 87.7% |
| 4492004 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 79.0 | 7.40e-01 | 100.0% | 92.2% |
| 2 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.83 | 73.0 | 7.18e-01 | 91.7% | 90.3% |
| 3274948 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 74.0 | 6.47e-01 | 100.0% | 65.8% |
| 3923810 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 74.0 | 7.27e-01 | 94.4% | 93.9% |
| 4993154 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 77.0 | 7.28e-01 | 100.0% | 86.7% |
| 3925599 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 78.0 | 7.06e-01 | 100.0% | 85.7% |
| 4969904 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.83 | 77.0 | 7.12e-01 | 100.0% | 82.2% |
| 5009916 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 74.0 | 7.51e-01 | 100.0% | 98.1% |
| 3932187 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 75.0 | 7.52e-01 | 97.2% | 96.4% |
| 4946870 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 77.0 | 7.05e-01 | 100.0% | 85.9% |
| 411665 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.82 | 68.0 | 6.74e-01 | 100.0% | 83.3% |
| 4984762 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.82 | 76.0 | 7.35e-01 | 100.0% | 91.7% |
| 5073196 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.82 | 77.0 | 7.33e-01 | 100.0% | 88.6% |
| 3934890 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 71.0 | 6.83e-01 | 92.6% | 100.0% |
| 3515226 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.81 | 71.0 | 7.23e-01 | 92.6% | 97.1% |
| 3514852 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 70.0 | 7.18e-01 | 91.7% | 95.2% |
| 3934130 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 75.0 | 7.02e-01 | 100.0% | 87.7% |
| 3505920 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 71.0 | 7.08e-01 | 93.5% | 94.5% |
| 3247514 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.80 | 71.0 | 7.25e-01 | 96.3% | 96.2% |
| 3513377 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.80 | 71.0 | 7.21e-01 | 99.1% | 97.1% |
| 3370298 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.80 | 74.0 | 7.35e-01 | 100.0% | 97.3% |
| 3935726 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.80 | 74.0 | 7.30e-01 | 100.0% | 94.7% |
| 4955491 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 73.0 | 6.78e-01 | 100.0% | 89.6% |
| 5034399 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.79 | 74.0 | 6.86e-01 | 100.0% | 86.5% |
| 3924552 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.79 | 74.0 | 7.12e-01 | 100.0% | 90.8% |
| 3484754 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 70.0 | 6.98e-01 | 100.0% | 92.7% |
| 5077747 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 73.0 | 6.91e-01 | 100.0% | 90.4% |
| 4656484 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.79 | 74.0 | 6.52e-01 | 100.0% | 87.3% |
| 3931343 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.79 | 72.0 | 7.11e-01 | 98.1% | 93.0% |
| 4999539 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 73.0 | 6.94e-01 | 100.0% | 96.0% |
| 4993389 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 73.0 | 7.07e-01 | 100.0% | 92.5% |
| 3972732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.78 | 70.0 | 6.61e-01 | 100.0% | 80.6% |
| 3922986 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.78 | 68.0 | 7.07e-01 | 99.1% | 100.0% |
| 3924493 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.78 | 64.0 | 6.76e-01 | 100.0% | 97.9% |
| 3926561 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.78 | 70.0 | 6.79e-01 | 100.0% | 87.5% |
| 3966871 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.78 | 71.0 | 6.62e-01 | 97.2% | 97.7% |
| 3512692 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.78 | 56.0 | 6.23e-01 | 74.1% | 100.0% |
| 5031162 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.78 | 72.0 | 7.05e-01 | 100.0% | 95.7% |
| 3506070 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.77 | 72.0 | 6.22e-01 | 100.0% | 93.1% |
| 3461051 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.77 | 71.0 | 6.80e-01 | 100.0% | 88.0% |
| 4933012 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.77 | 71.0 | 6.84e-01 | 100.0% | 95.0% |
| 3935948 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.77 | 71.0 | 6.98e-01 | 99.1% | 94.8% |
| 3902845 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.77 | 71.0 | 6.62e-01 | 100.0% | 89.2% |
| 3797424 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.76 | 70.0 | 6.06e-01 | 100.0% | 87.9% |
| 4992731 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.75 | 70.0 | 6.90e-01 | 100.0% | 96.5% |
| 5031967 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.75 | 58.0 | 5.82e-01 | 81.5% | 81.8% |
| 3516105 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.75 | 69.0 | 6.40e-01 | 100.0% | 91.9% |
| 4088845 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.75 | 69.0 | 4.64e-01 | 100.0% | 39.9% |
| 3879529 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.75 | 69.0 | 4.66e-01 | 100.0% | 41.6% |
| 3693036 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.75 | 69.0 | 4.59e-01 | 100.0% | 43.1% |
| 4968048 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.74 | 61.0 | 6.18e-01 | 88.0% | 99.0% |
| 4993449 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.71 | 62.0 | 6.33e-01 | 93.5% | 100.0% |
| 3336345 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.67 | 62.0 | 5.48e-01 | 99.1% | 93.3% |
| 3723709 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.66 | 49.0 | 5.25e-01 | 76.9% | 100.0% |
| 5001969 | 375.1.1.338 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 | 0.55 | 37.0 | 4.13e-01 | 100.0% | 95.0% |
D2
medium
residues 124-184