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IMGVR_UViG_3300043425_000872-3300043425-Ga0451744_0000302_46458_47303

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300043425_000872-3300043425-Ga0451744_0000302_46458_47303 ↗
Kingdom:: archaea

Quality

90.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-196

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00176.30 best	SNF2-rel_dom	38.1	1.40e-09	100.0%	52.4%

D2 high residues 222-281

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ctdA00	3.30.160.60	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger	0.62	38.0	3.31e-01	88.3%	38.5%
7r0kA02	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.58	46.0	3.40e-01	90.0%	41.0%
2cw7A02	1.10.10.1010	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV	0.56	44.0	3.39e-01	88.3%	66.4%
3gwjA02	1.10.1280.10	Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase	0.56	46.0	3.23e-01	100.0%	26.6%
2bcqA04	3.30.210.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain	0.55	34.0	3.30e-01	76.7%	53.7%
3py8A04	1.10.150.20	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain	0.55	42.0	3.27e-01	88.3%	36.1%
8d3mA02	1.20.120.920	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain	0.53	40.0	2.74e-01	83.3%	46.3%
4p4mA03	3.30.210.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain	0.51	36.0	3.27e-01	80.0%	51.1%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4032716	2004.1.1.30 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C	0.88	82.0	5.39e-01	100.0%	27.9%
3740384	1021.1.1.0 ↗	a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases	0.63	42.0	4.14e-01	98.3%	63.1%
4175983	146.1.1.3 ↗	alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain › Hemocyanin_M	0.59	50.0	3.28e-01	100.0%	24.1%
4275738	7510.1.1.1 ↗	a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh	0.57	39.0	2.74e-01	71.7%	90.0%
3064403	7085.1.1.1 ↗	alpha arrays › Twin-arginine translocation pathway signal › Twin-arginine translocation pathway signal › Twin-arginine translocation pathway signal › FAD-SLDH	0.55	47.0	3.72e-01	100.0%	66.9%
3427280	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.54	32.0	3.38e-01	78.3%	66.0%
5009885	3352.1.1.0 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain	0.54	38.0	2.35e-01	100.0%	13.0%
3289475	3978.1.1.2 ↗	alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_hydroxylase	0.52	44.0	3.14e-01	100.0%	69.7%
4519317	304.56.1.2 ↗	a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2	0.51	36.0	3.19e-01	73.3%	70.6%