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IMGVR_UViG_3300043429_000738-3300043429-Ga0451752_0000177_16118_20248

Arc-Vir

IMGVR_UViG_3300043429_000738-3300043429-Ga0451752_0000177_16118_20248

Identity

Kingdom:
archaea

Quality

61.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-123
PDB
Domain cluster: rep: S27_BME27_1069154_prodigal-single.1__X__X__00299__D30-118
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA02 2.60.120.640 Mainly Beta › Sandwich › Jelly Rolls › gp9 0.71 64.0 6.47e-01 100.0% 98.1%
2yzsA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.53 37.0 4.06e-01 84.8% 95.0%
2prxA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 41.0 4.07e-01 84.8% 88.6%
8d3lA01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.52 36.0 3.95e-01 72.4% 88.6%
4n06A01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.52 37.0 4.01e-01 96.2% 95.1%
7cr6D01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.52 36.0 3.99e-01 83.8% 95.1%
4lwoB02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.51 42.0 3.46e-01 88.6% 99.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
184462 520.1.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 0.71 64.0 5.41e-01 100.0% 60.7%
1070458 520.1.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › T4_gp9_10 0.69 63.0 5.43e-01 100.0% 66.9%
3552497 9.3.1.7 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Pep_M12B_propep 0.55 34.0 3.44e-01 92.4% 61.0%
5052847 246.1.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase 0.51 43.0 3.27e-01 100.0% 38.8%
D2 high residues 130-243
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.78 59.0 6.56e-01 83.3% 100.0%
6o38A01 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.77 59.0 6.45e-01 79.8% 100.0%
6o38A03 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.74 53.0 6.02e-01 74.6% 100.0%
6o38A02 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.74 56.0 6.17e-01 79.8% 100.0%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.71 60.0 6.16e-01 93.9% 94.5%
3ragB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.66 46.0 3.64e-01 71.1% 86.3%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.60 43.0 4.48e-01 95.6% 81.1%
1x8mA01 2.60.120.520 Mainly Beta › Sandwich › Jelly Rolls › pectin degrading enzyme 5-keto 4- deoxyuronate isomerase, domain 1 0.51 44.0 4.38e-01 95.6% 99.2%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581340 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.78 57.0 6.48e-01 79.8% 100.0%
2581337 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.77 60.0 6.51e-01 80.7% 100.0%
4561709 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.75 57.0 6.37e-01 80.7% 100.0%
3942383 520.2.1.0 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE 0.70 53.0 5.79e-01 92.1% 100.0%
4667612 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.63 55.0 4.26e-01 99.1% 86.4%
7233 207.5.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C 0.60 43.0 4.48e-01 95.6% 80.4%
3715374 207.14.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet 0.58 38.0 3.98e-01 89.5% 72.4%
4023937 207.4.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.57 42.0 4.04e-01 95.6% 65.2%
3982197 207.2.1.25 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AIDA 0.50 44.0 3.08e-01 100.0% 44.6%
D3 high residues 253-352
PDB
Domain cluster: rep: S27_BME27_1069154_prodigal-single.1__X__X__00299__D30-118
D4 high residues 441-508
PDB
Domain cluster: rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00468__D116-186
D5 high residues 534-621_734-798_812-829
PDB
D6 high residues 919-985
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00033__D130-198
D7 high residues 1058-1129
PDB
Domain cluster: rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00033__D130-198
D8 medium residues 622-667_679-713
PDB
D9 medium residues 1137-1203
PDB