←Back to structures
IMGVR_UViG_3300043429_000738-3300043429-Ga0451752_0000177_47618_49540
Arc-VirIMGVR_UViG_3300043429_000738-3300043429-Ga0451752_0000177_47618_49540
Identity
- Kingdom:
- archaea
Quality
50.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-175_618-639
Domain cluster:
rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00145.24 best | DNA_methylase | 152.9 | 2.00e-44 | 92.3% | 49.7% |
D2
medium
residues 561-617
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00145.24 best | DNA_methylase | 25.7 | 1.10e-05 | 98.2% | 11.7% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.52 | 35.0 | 3.71e-01 | 75.4% | 83.7% |
| 2kivA02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.51 | 34.0 | 3.44e-01 | 71.9% | 98.3% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.51 | 34.0 | 2.97e-01 | 70.2% | 74.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3892060 | 2003.1.5.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase | 0.87 | 61.0 | 3.73e-01 | 86.0% | 13.8% |
| 3520440 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.86 | 61.0 | 3.85e-01 | 86.0% | 16.8% |
| 3452652 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.68 | 60.0 | 3.94e-01 | 94.7% | 30.0% |
| 3957040 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.51 | 38.0 | 3.29e-01 | 82.5% | 54.7% |