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IMGVR_UViG_3300043429_000738-3300043429-Ga0451752_0000177_5107_6282
Arc-VirIMGVR_UViG_3300043429_000738-3300043429-Ga0451752_0000177_5107_6282
Identity
- Kingdom:
- archaea
Quality
80.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 103-149_245-388
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.60 | 26.0 | 3.50e-01 | 89.5% | 74.5% |
| 2aaoB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 34.0 | 3.88e-01 | 96.3% | 84.2% |
| 1eqfA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.54 | 29.0 | 3.39e-01 | 99.0% | 74.4% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.54 | 27.0 | 3.20e-01 | 92.1% | 69.4% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.53 | 21.0 | 3.04e-01 | 84.8% | 78.2% |
| 5b7cA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 24.0 | 2.94e-01 | 81.7% | 67.6% |
| 1zylA03 | 1.20.1270.170 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 26.0 | 3.34e-01 | 91.6% | 86.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4472037 | 102.1.2.5 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › Ogg-HhH | 0.71 | 61.0 | 5.91e-01 | 89.5% | 100.0% |
| 4014467 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.60 | 50.0 | 4.28e-01 | 86.9% | 77.6% |
D2
medium
residues 150-244
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.62 | 43.0 | 4.56e-01 | 100.0% | 85.2% |
| 3cesA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.58 | 41.0 | 4.22e-01 | 96.8% | 78.3% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.55 | 32.0 | 3.11e-01 | 96.8% | 49.5% |
| 1wlmA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 41.0 | 4.00e-01 | 77.9% | 100.0% |
| 5hdiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 45.0 | 3.07e-01 | 100.0% | 57.2% |
| 3gwjA02 | 1.10.1280.10 | Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase | 0.52 | 44.0 | 3.31e-01 | 92.6% | 67.4% |
| 1sj7C00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.52 | 40.0 | 3.35e-01 | 83.2% | 66.9% |
| 5g5gA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.51 | 43.0 | 4.44e-01 | 98.9% | 98.9% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 37.0 | 3.59e-01 | 80.0% | 94.5% |
| 2r6fA02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.50 | 43.0 | 3.76e-01 | 100.0% | 84.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3473556 | 592.1.1.7 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PF26091 | 0.74 | 52.0 | 5.89e-01 | 100.0% | 98.6% |
| 3621977 | 3198.1.1.1 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA | 0.60 | 39.0 | 3.72e-01 | 100.0% | 54.8% |
| 3718295 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.56 | 48.0 | 4.93e-01 | 100.0% | 97.8% |
| None | — | 0.56 | 48.0 | 2.84e-01 | 98.9% | 13.4% | |
| 3240237 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.55 | 47.0 | 4.64e-01 | 100.0% | 87.6% |
| 3834982 | 3444.1.1.6 ↗ | alpha arrays › DP domain › DP domain › DP domain › VDE | 0.51 | 37.0 | 4.00e-01 | 98.9% | 100.0% |
| 3253573 | 593.1.1.0 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like | 0.50 | 38.0 | 2.79e-01 | 81.1% | 67.9% |