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IMGVR_UViG_3300044273_000101-3300044273-Ga0467084_002635_931_1266

Arc-Vir

IMGVR_UViG_3300044273_000101-3300044273-Ga0467084_002635_931_1266

Quality

92.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-108
PDB
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7csoA01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.77 43.0 3.30e-01 100.0% 26.4%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.77 44.0 5.13e-01 93.4% 78.2%
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.74 46.0 3.93e-01 100.0% 39.9%
4dxwA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 56.0 5.52e-01 100.0% 75.9%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 40.0 4.27e-01 92.5% 60.4%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 43.0 3.43e-01 100.0% 31.2%
7e5aB02 1.20.1000.10 Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain 0.68 55.0 4.72e-01 90.6% 55.5%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.67 42.0 4.58e-01 77.4% 75.3%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.66 42.0 4.22e-01 70.8% 63.6%
3vw4A01 1.10.340.50 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.65 42.0 4.48e-01 85.8% 73.9%
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.65 43.0 4.48e-01 76.4% 71.7%
4hzuS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.65 54.0 4.74e-01 92.5% 88.4%
4b4yA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 46.0 4.11e-01 76.4% 91.9%
4akvA02 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.63 43.0 3.50e-01 70.8% 54.7%
2mabA00 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.62 43.0 4.30e-01 85.8% 68.8%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.62 45.0 3.82e-01 74.5% 49.1%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 45.0 4.95e-01 84.0% 93.1%
1hbgA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 47.0 4.22e-01 81.1% 93.9%
3ljbA00 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.61 51.0 4.08e-01 90.6% 70.8%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 48.0 4.68e-01 84.0% 97.4%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 4.45e-01 80.2% 85.2%
4me9B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 44.0 3.65e-01 76.4% 51.6%
2ddhA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.60 42.0 3.94e-01 72.6% 85.6%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 44.0 3.97e-01 76.4% 91.7%
1oshA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.60 45.0 3.58e-01 81.1% 38.9%
8ek4A01 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.59 48.0 4.43e-01 85.8% 92.5%
3hyuA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 46.0 4.20e-01 84.9% 95.7%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.58 46.0 4.28e-01 84.9% 92.5%
5tpmB00 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.58 44.0 4.05e-01 81.1% 65.2%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.58 46.0 4.31e-01 85.8% 97.7%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 48.0 4.32e-01 91.5% 88.7%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 40.0 3.76e-01 89.6% 59.1%
1r0dA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.57 51.0 4.24e-01 100.0% 71.5%
4l8iB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.57 47.0 4.61e-01 86.8% 94.6%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 44.0 3.99e-01 83.0% 93.2%
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 44.0 3.99e-01 83.0% 95.9%
3ez0C00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 42.0 3.42e-01 77.4% 96.2%
2jqqA00 1.20.58.1240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 42.0 3.71e-01 83.0% 53.9%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 45.0 4.16e-01 87.7% 77.9%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.55 43.0 4.62e-01 86.8% 95.7%
3f2eA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 40.0 4.36e-01 84.0% 97.6%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.55 35.0 3.73e-01 72.6% 75.3%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.54 43.0 3.88e-01 86.8% 71.6%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.54 42.0 4.22e-01 83.0% 92.5%
1x9fA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 42.0 3.79e-01 84.9% 93.9%
1x8zB00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.53 43.0 3.91e-01 89.6% 77.6%
3kavA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.53 40.0 4.13e-01 82.1% 89.2%
1gcvB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 39.0 3.64e-01 79.2% 91.9%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 49.0 4.21e-01 100.0% 95.6%
4py6C00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 44.0 4.18e-01 92.5% 88.2%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.52 39.0 3.94e-01 80.2% 79.1%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 38.0 4.11e-01 80.2% 90.1%
1urvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 41.0 3.61e-01 84.0% 79.2%
2jswA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.52 43.0 3.64e-01 93.4% 71.4%
3bt5A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 45.0 4.01e-01 95.3% 68.2%
1ngkB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 3.61e-01 78.3% 90.6%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 43.0 3.92e-01 92.5% 98.6%
3ab3D00 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.51 38.0 3.34e-01 80.2% 88.5%
4aciA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 38.0 3.22e-01 79.2% 54.0%
5ko4A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.50 39.0 3.98e-01 83.0% 88.1%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3799 603.6.1.1 alpha bundles › STAT-like › MukF C-terminal domain-like › MukF C-terminal domain-like › MukF_M 0.74 46.0 3.93e-01 100.0% 39.9%
4629385 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.72 47.0 4.19e-01 100.0% 47.3%
3958574 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.71 46.0 3.91e-01 100.0% 41.8%
3723625 592.2.1.2 alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG 0.70 56.0 5.20e-01 92.5% 67.4%
4983800 1076.1.1.3 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › YhfC 0.66 52.0 3.88e-01 83.0% 72.2%
3236728 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.65 54.0 4.68e-01 89.6% 88.5%
3971610 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.65 48.0 3.66e-01 75.5% 38.2%
3503359 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.64 52.0 4.58e-01 87.7% 85.8%
3995679 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.64 51.0 4.40e-01 86.8% 91.2%
3924719 371.1.1.0 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.63 50.0 5.18e-01 88.7% 94.7%
154767 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.63 46.0 4.11e-01 76.4% 91.9%
5057325 604.39.1.3 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS 0.62 53.0 4.45e-01 95.3% 74.2%
3219393 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.62 50.0 4.24e-01 86.8% 90.9%
5032080 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.62 36.0 3.57e-01 88.7% 53.9%
4996069 604.10.1.0 alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.61 42.0 4.60e-01 70.8% 91.1%
3478766 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.61 53.0 4.52e-01 96.2% 93.1%
3975800 5065.1.1.2 alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD 0.60 48.0 3.42e-01 85.8% 56.9%
3180887 174.1.1.9 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF1746 0.60 52.0 4.91e-01 96.2% 80.0%
3407923 192.24.1.1 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RPC3_helical 0.60 44.0 4.60e-01 100.0% 82.0%
3623181 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.60 51.0 4.45e-01 94.3% 92.7%
3998861 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.60 44.0 3.78e-01 78.3% 87.4%
380191 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.59 47.0 4.18e-01 85.8% 94.2%
3260973 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 45.0 4.52e-01 80.2% 87.3%
51190 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.59 46.0 4.11e-01 84.0% 94.2%
3601936 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.59 46.0 4.22e-01 84.0% 97.1%
3885014 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 45.0 4.33e-01 80.2% 85.0%
3941012 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.58 47.0 3.19e-01 85.8% 63.6%
3518542 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.58 52.0 4.36e-01 99.1% 91.7%
3413881 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.58 51.0 4.25e-01 100.0% 86.7%
3590548 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.58 50.0 3.92e-01 95.3% 81.3%
3268456 109.6.1.0 alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF 0.57 36.0 3.23e-01 70.8% 43.9%
3856852 310.2.1.19 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RasGAP_C 0.57 41.0 4.05e-01 74.5% 80.9%
3876247 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 45.0 4.34e-01 83.0% 95.0%
3176307 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.56 44.0 4.03e-01 84.0% 90.7%
3280795 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.56 43.0 3.91e-01 80.2% 71.4%
4030833 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.56 49.0 3.90e-01 100.0% 70.2%
50988 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.56 44.0 3.99e-01 85.8% 95.2%
3608570 601.19.1.0 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.55 48.0 4.00e-01 97.2% 57.9%
4936312 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.55 43.0 4.24e-01 82.1% 90.9%
3981622 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.55 41.0 3.45e-01 79.2% 85.4%
4928232 191.1.1.63 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_N 0.54 40.0 3.39e-01 79.2% 51.9%
3505833 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.54 40.0 3.37e-01 79.2% 84.9%
3408207 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.53 43.0 3.93e-01 96.2% 65.0%
4634565 191.1.1.0 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.53 37.0 3.46e-01 73.6% 72.7%
3935113 106.1.1.0 alpha arrays › Globin-like › Globin-like › Globin-like 0.53 43.0 3.72e-01 88.7% 92.9%
1019364 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.52 42.0 4.21e-01 87.7% 92.8%
5010685 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 41.0 3.74e-01 87.7% 67.3%
3281786 371.1.1.0 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.51 42.0 3.93e-01 93.4% 71.1%
4945001 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.51 41.0 4.19e-01 93.4% 94.0%