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IMGVR_UViG_3300045988_008371-3300045988-Ga0495776_102399_4671_5096

Arc-Vir

IMGVR_UViG_3300045988_008371-3300045988-Ga0495776_102399_4671_5096

Identity

Kingdom:
archaea

Quality

77.9 mean pLDDT

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-127
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfA03 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.84 55.0 5.58e-01 100.0% 68.3%
1zc1A01 2.40.40.50 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain 0.73 51.0 5.17e-01 100.0% 72.8%
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.72 47.0 4.95e-01 100.0% 73.4%
3ougA00 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.71 47.0 4.70e-01 100.0% 66.0%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.71 46.0 5.04e-01 100.0% 82.9%
1ynjD04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.70 65.0 5.77e-01 100.0% 77.2%
7eu1A01 1.10.274.100 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 0.67 56.0 5.01e-01 100.0% 65.5%
3d30A01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.66 53.0 5.23e-01 100.0% 81.5%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3966248 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.86 56.0 5.39e-01 100.0% 60.0%
4887355 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.82 54.0 5.05e-01 100.0% 55.6%
3684523 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.81 56.0 5.20e-01 100.0% 58.4%
4991006 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 51.0 5.55e-01 100.0% 81.2%
3412967 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.77 51.0 5.47e-01 92.3% 77.8%
3267813 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.76 50.0 5.47e-01 92.3% 81.2%
2886100 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.76 70.0 5.61e-01 100.0% 61.9%
3477728 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.75 49.0 5.12e-01 92.3% 72.6%
4040376 1.1.2.6 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.74 47.0 4.41e-01 100.0% 51.5%
2968637 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.74 69.0 5.81e-01 100.0% 71.3%
4890564 101.1.2.869 ↗ alpha arrays › HTH › HTH › winged helix domain › IML1_N 0.74 47.0 5.29e-01 91.3% 84.0%
4299713 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.73 50.0 5.03e-01 100.0% 69.5%
3974469 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.72 47.0 4.95e-01 100.0% 72.6%
4129914 1.1.2.31 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 0.72 67.0 5.18e-01 100.0% 50.7%
4886549 275.1.1.1 ↗ a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › RNA_pol_Rpb1_2 0.72 67.0 5.78e-01 100.0% 70.3%
4419943 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.71 47.0 4.79e-01 100.0% 69.0%
4116299 1.1.2.26 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 0.70 52.0 5.40e-01 100.0% 84.2%
5001338 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.70 48.0 5.05e-01 100.0% 77.9%
4871383 1.1.2.26 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › N1_PEX6 0.69 50.0 5.27e-01 100.0% 84.9%
3735360 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 48.0 4.78e-01 100.0% 70.0%
5081033 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 62.0 4.93e-01 100.0% 69.5%
4048983 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 50.0 5.08e-01 100.0% 79.0%
3426007 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.66 50.0 4.74e-01 100.0% 66.4%
5058903 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.66 62.0 4.96e-01 100.0% 73.2%
3509068 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.66 62.0 4.86e-01 100.0% 73.0%
3342891 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.66 52.0 4.80e-01 100.0% 65.2%
4943460 1.1.2.2 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 0.65 60.0 4.90e-01 100.0% 72.4%
3627192 11.1.4.71 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_7th 0.62 33.0 3.81e-01 90.4% 72.9%
4670243 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.61 45.0 4.61e-01 100.0% 80.0%
4406910 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.60 40.0 4.07e-01 94.2% 70.0%
3190316 1.1.2.5 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › Glyco_hydro_45 0.59 54.0 4.17e-01 100.0% 60.5%
4486888 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.58 46.0 4.87e-01 100.0% 96.7%
4013955 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.57 49.0 4.63e-01 100.0% 77.6%
3627366 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.54 40.0 4.10e-01 100.0% 82.0%