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IMGVR_UViG_3300045988_026705-3300045988-Ga0495776_073732_38096_38722
Arc-VirIMGVR_UViG_3300045988_026705-3300045988-Ga0495776_073732_38096_38722
Identity
- Kingdom:
- archaea
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-207
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.57 | 23.0 | 2.58e-01 | 70.2% | 47.5% |
| 1jdpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 38.0 | 3.40e-01 | 70.2% | 93.3% |
| 6upsA01 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.55 | 38.0 | 3.60e-01 | 71.8% | 86.5% |
| 1uurA04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 41.0 | 4.05e-01 | 81.5% | 75.2% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 37.0 | 4.05e-01 | 72.6% | 100.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3872316 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.60 | 43.0 | 3.84e-01 | 74.2% | 95.6% |
| 5039314 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.60 | 33.0 | 3.09e-01 | 71.0% | 42.6% |
| 3539914 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.58 | 40.0 | 3.53e-01 | 70.2% | 88.6% |
| 3217862 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.56 | 43.0 | 3.64e-01 | 83.1% | 95.0% |
| 4954874 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 27.0 | 3.41e-01 | 75.0% | 82.7% |
| 4982659 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.50 | 43.0 | 3.12e-01 | 93.5% | 56.0% |
D2
medium
residues 1-63
Domain cluster:
rep: IMGVR_UViG_3300045988_021992-3300045988-Ga0495776_073668_26456_26866__D2-59