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IMGVR_UViG_3300045988_034014-3300045988-Ga0495776_075620_57658_58194
Arc-VirIMGVR_UViG_3300045988_034014-3300045988-Ga0495776_075620_57658_58194
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-129
Domain cluster:
rep: SRR1747059_scaffold_22_prodigal-single.1__X__X__00077__D2-29_67-126
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.63 | 27.0 | 3.39e-01 | 87.5% | 63.4% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 29.0 | 3.40e-01 | 95.5% | 59.3% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.62 | 35.0 | 2.98e-01 | 75.9% | 36.0% |
| 2fyxA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.61 | 36.0 | 3.43e-01 | 81.2% | 50.0% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.61 | 41.0 | 3.89e-01 | 90.2% | 58.0% |
| 1vigA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.61 | 31.0 | 3.77e-01 | 75.0% | 76.1% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 31.0 | 3.71e-01 | 100.0% | 74.3% |
| 1dq3A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 34.0 | 3.81e-01 | 100.0% | 71.3% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 33.0 | 3.67e-01 | 100.0% | 69.8% |
| 3afgB01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.58 | 30.0 | 3.38e-01 | 93.8% | 63.2% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 30.0 | 3.49e-01 | 80.4% | 72.0% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 32.0 | 3.53e-01 | 100.0% | 69.3% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 28.0 | 2.88e-01 | 94.6% | 47.4% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.52 | 47.0 | 4.13e-01 | 99.1% | 83.0% |
| 6u6pA01 | 3.30.1070.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE | 0.52 | 35.0 | 4.08e-01 | 94.6% | 100.0% |
| 2q5xA00 | 3.30.1610.10 | Alpha Beta › 2-Layer Sandwich › c-terminal autoproteolytic domain of nucleoporin nup98 › Peptidase S59, nucleoporin | 0.51 | 43.0 | 3.95e-01 | 94.6% | 69.5% |
| 3c1mA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 45.0 | 4.02e-01 | 100.0% | 87.8% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.50 | 45.0 | 4.00e-01 | 99.1% | 86.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 167371 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.69 | 35.0 | 4.20e-01 | 75.0% | 73.6% |
| 5033078 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.67 | 33.0 | 4.05e-01 | 75.9% | 74.3% |
| 5082025 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.67 | 32.0 | 3.84e-01 | 75.0% | 66.7% |
| 5025962 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 33.0 | 3.80e-01 | 100.0% | 66.3% |
| 4477962 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 31.0 | 3.80e-01 | 75.0% | 70.0% |
| 4663291 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 32.0 | 3.74e-01 | 73.2% | 65.0% |
| 5049638 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 31.0 | 4.05e-01 | 85.7% | 85.0% |
| 3814809 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.62 | 35.0 | 3.57e-01 | 71.4% | 56.4% |
| 5035705 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.60 | 28.0 | 3.21e-01 | 83.9% | 56.5% |
| 3524888 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.60 | 32.0 | 3.87e-01 | 83.9% | 81.4% |
| 4934140 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.59 | 31.0 | 3.12e-01 | 100.0% | 48.7% |
| 3296288 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.59 | 34.0 | 3.43e-01 | 88.4% | 56.4% |
| 3575847 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.59 | 31.0 | 3.16e-01 | 79.5% | 48.7% |
| 3249761 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.58 | 30.0 | 3.43e-01 | 94.6% | 65.9% |
| 3539036 | 304.9.1.18 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Tap-RNA_bind | 0.57 | 29.0 | 3.22e-01 | 77.7% | 58.9% |
| 4999898 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 33.0 | 3.58e-01 | 100.0% | 71.1% |
| 4321513 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.54 | 27.0 | 2.81e-01 | 94.6% | 48.2% |
| 4608678 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.54 | 31.0 | 3.60e-01 | 100.0% | 78.8% |
| 4225320 | 306.3.1.4 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › PFF1_C | 0.54 | 32.0 | 3.28e-01 | 100.0% | 60.0% |
| 3619798 | 3122.1.1.1 ↗ | a+b complex topology › MESD › MESD › MESD › Mesd | 0.53 | 37.0 | 3.54e-01 | 70.5% | 76.9% |
| 4010459 | 310.3.1.4 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › GspL_C | 0.53 | 31.0 | 3.04e-01 | 100.0% | 51.7% |
| 4250326 | 328.5.1.5 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › AnfO_nitrog | 0.53 | 30.0 | 3.57e-01 | 100.0% | 80.0% |
| 3616815 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.52 | 29.0 | 3.68e-01 | 83.9% | 98.3% |
| 4945580 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.52 | 35.0 | 4.07e-01 | 89.3% | 96.2% |
| 4987072 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.52 | 34.0 | 4.03e-01 | 88.4% | 94.9% |
| 5012030 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.52 | 30.0 | 3.74e-01 | 99.1% | 92.9% |
| 4981701 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.51 | 30.0 | 3.84e-01 | 99.1% | 100.0% |
| 4992248 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.51 | 31.0 | 3.86e-01 | 92.0% | 98.6% |
| 4934080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 46.0 | 4.20e-01 | 100.0% | 81.3% |
| 4929225 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.51 | 46.0 | 4.16e-01 | 100.0% | 80.7% |
| 3970617 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.50 | 32.0 | 3.84e-01 | 90.2% | 97.3% |
| 4988529 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.50 | 35.0 | 4.06e-01 | 89.3% | 97.6% |