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IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_24978_25499

Arc-Vir

IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_24978_25499

Identity

Kingdom:
archaea

Quality

77.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-173
PDB
Domain cluster: rep: NC_041872.1__YP_009594102.1__FDG89_gp46__00046__D1-189
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.65 31.0 4.15e-01 78.0% 84.9%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.63 27.0 3.83e-01 85.5% 82.4%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.60 27.0 3.49e-01 79.2% 72.4%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.60 26.0 3.44e-01 79.2% 72.6%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 26.0 3.72e-01 85.0% 87.3%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 26.0 3.61e-01 85.5% 83.3%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 31.0 3.89e-01 77.5% 87.4%
3fgvA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 26.0 3.48e-01 83.8% 82.8%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 24.0 3.20e-01 86.1% 82.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974320 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 26.0 3.79e-01 83.2% 78.8%
5046762 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.64 29.0 3.93e-01 84.4% 81.1%
4933397 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.62 26.0 3.71e-01 81.5% 81.2%
4998391 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 32.0 4.23e-01 76.9% 94.4%
5030879 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.61 27.0 3.65e-01 79.2% 77.8%
5075438 304.4.1.29 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg_3 0.60 26.0 3.60e-01 79.2% 80.0%
5033229 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 27.0 3.57e-01 82.1% 76.7%
4950375 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.60 26.0 3.53e-01 79.2% 77.3%
4945140 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 26.0 3.51e-01 83.2% 76.7%
4961351 242.1.1.10 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › PF26411 0.59 34.0 4.13e-01 74.0% 87.3%
4993850 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 32.0 4.15e-01 76.9% 94.7%
3593495 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.57 27.0 3.47e-01 83.8% 76.8%
3364258 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.57 30.0 4.14e-01 72.3% 100.0%
4992616 304.165.1.0 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.57 44.0 4.72e-01 79.2% 97.9%
4928824 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 28.0 3.62e-01 88.4% 83.2%
3800971 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 29.0 3.52e-01 94.8% 75.5%
5032056 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 29.0 3.67e-01 88.4% 84.5%
4961951 304.165.1.2 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT 0.55 43.0 4.65e-01 82.7% 98.6%
4960640 304.165.1.4 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2525_N 0.54 43.0 4.60e-01 83.2% 99.3%
5013605 304.165.1.0 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.54 41.0 4.45e-01 79.8% 97.2%
4980724 304.165.1.4 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2525_N 0.54 41.0 4.41e-01 79.2% 97.2%
4965026 304.165.1.2 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT 0.54 41.0 4.32e-01 79.2% 92.0%
4999334 304.165.1.4 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2525_N 0.53 38.0 4.31e-01 72.3% 100.0%
4028770 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.51 25.0 3.25e-01 91.3% 83.3%
4929060 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 27.0 3.49e-01 90.8% 89.0%
4001363 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 33.0 3.66e-01 83.8% 83.7%