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IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_30418_30684
Arc-VirIMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_30418_30684
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-83
Domain cluster:
rep: IMGVR_UViG_3300045988_180032-3300045988-Ga0495776_068882_40536_40739__D2-66
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 2.85e-01 | 83.3% | 45.6% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 2.69e-01 | 84.8% | 61.2% |
| 2z86D02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.51 | 37.0 | 2.64e-01 | 83.3% | 86.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3199259 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.60 | 42.0 | 4.27e-01 | 72.7% | 83.1% |
| 4004145 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.58 | 39.0 | 2.77e-01 | 71.2% | 53.5% |
| 3387257 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.54 | 38.0 | 2.66e-01 | 74.2% | 52.9% |
| 4468497 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.54 | 41.0 | 3.60e-01 | 84.8% | 89.5% |
| 3940062 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.54 | 41.0 | 2.70e-01 | 86.4% | 61.3% |
| 4486888 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.53 | 37.0 | 3.42e-01 | 87.9% | 55.6% |
| 3406351 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 36.0 | 3.07e-01 | 77.3% | 42.7% |
| 5055279 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.52 | 39.0 | 2.82e-01 | 81.8% | 91.7% |
| 3512685 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.50 | 37.0 | 3.06e-01 | 83.3% | 71.9% |
| 4903854 | 4.1.1.16 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e,Ribosomal_L6e_N | 0.50 | 36.0 | 2.69e-01 | 75.8% | 51.8% |
| 3079244 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.50 | 29.0 | 2.99e-01 | 72.7% | 60.0% |