IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_34999_36969

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_34999_36969 ↗
Kingdom:: archaea

86.9 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 114-246

PDB

Domain cluster: rep: IMGVR_UViG_3300045988_008371-3300045988-Ga0495776_102399_4671_5096__D24-127

D2 medium residues 1-110

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mabA00	1.10.10.1350	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain	0.62	33.0	3.37e-01	77.3%	50.5%
1gaxA05	1.10.287.380	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain	0.59	33.0	3.92e-01	98.2%	82.2%
6p73A02	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.54	40.0	3.70e-01	100.0%	60.1%
7qx4A01	1.20.190.10	Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain	0.53	38.0	3.07e-01	74.5%	95.7%
2pmsC00	6.10.140.920	Special › Helix non-globular › Helix Hairpins ›	0.52	38.0	3.84e-01	100.0%	75.2%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3917917	604.1.1.0 ↗	alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat	0.63	32.0	3.29e-01	87.3%	47.3%
4594504	4967.1.1.0 ↗	alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases	0.60	35.0	3.01e-01	91.8%	36.0%
3249883	101.1.10.7 ↗	alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C	0.58	30.0	2.96e-01	81.8%	42.4%
3870505	7529.1.1.17 ↗	a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › PF30680	0.57	31.0	2.17e-01	95.5%	16.9%
3910597	603.1.1.8 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Spectrin_2	0.57	38.0	3.67e-01	97.3%	60.0%
3782183	219.1.1.0 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases	0.52	39.0	2.57e-01	100.0%	18.5%
3960659	150.8.1.1 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE	0.52	40.0	3.96e-01	100.0%	75.0%

D3 medium residues 258-315

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3g2bA00	1.10.10.1150	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD)	0.59	41.0	3.52e-01	94.8%	45.6%
4nv0A02	1.10.150.340	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain	0.55	40.0	3.69e-01	82.8%	85.4%
1cmxA00	3.40.532.10	Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase	0.53	39.0	2.68e-01	81.0%	94.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4471297	7512.1.1.1 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT	0.59	43.0	2.96e-01	79.3%	91.7%
3036753	397.7.1.0 ↗	few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1	0.55	40.0	4.08e-01	89.7%	80.4%

D4 medium residues 342-511

PDB

Domain cluster: rep: SRR1747059_scaffold_22_prodigal-single.1__X__X__00084__D14-155

D5 medium residues 512-656

PDB

Domain cluster: rep: IMGVR_UViG_3300045988_008371-3300045988-Ga0495776_102399_3033_3893__D1-136