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IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_37804_38187
Arc-VirIMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_37804_38187
Identity
- Kingdom:
- archaea
Quality
83.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-103
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o92A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 30.0 | 3.03e-01 | 89.3% | 47.6% |
| 1ztdA00 | 1.10.1520.20 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III | 0.53 | 36.0 | 3.38e-01 | 72.8% | 57.6% |
| 3fedA03 | 1.20.930.40 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Transferrin receptor-like, dimerisation domain | 0.52 | 37.0 | 3.23e-01 | 73.8% | 91.6% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.50 | 37.0 | 3.29e-01 | 78.6% | 68.0% |
| 2m7aA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 29.0 | 3.10e-01 | 100.0% | 64.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589919 | 102.1.4.2 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain › Transposase_20 | 0.62 | 43.0 | 3.93e-01 | 71.8% | 70.0% |
| 4276444 | 109.4.1.3238 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HopW1-1 | 0.55 | 44.0 | 3.20e-01 | 85.4% | 57.5% |
| 4042986 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.54 | 33.0 | 3.44e-01 | 81.6% | 64.0% |
| 4973336 | 4163.1.1.4 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › PF27418 | 0.52 | 36.0 | 3.57e-01 | 84.5% | 67.3% |
| 5037670 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.51 | 40.0 | 3.29e-01 | 81.6% | 83.4% |