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IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_39481_39813
Arc-VirIMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_39481_39813
Identity
- Kingdom:
- archaea
Quality
91.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-109
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bf9A02 | 1.20.225.30 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Dihydrouridine synthase, C-terminal recognition domain | 0.58 | 49.0 | 4.83e-01 | 92.9% | 89.0% |
| 1n1cA01 | 1.20.120.1820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 43.0 | 3.70e-01 | 87.1% | 56.5% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.54 | 36.0 | 3.92e-01 | 75.7% | 87.3% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 38.0 | 3.60e-01 | 78.6% | 79.3% |
| 1jetA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.51 | 41.0 | 3.02e-01 | 92.9% | 83.3% |
| 5ejrA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.51 | 38.0 | 2.83e-01 | 82.9% | 31.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3648523 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 52.0 | 4.74e-01 | 100.0% | 79.0% |
| 3811894 | 2484.1.1.198 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 | 0.61 | 52.0 | 3.30e-01 | 100.0% | 18.3% |
| 3642853 | 101.1.1.343 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF4371 | 0.61 | 52.0 | 4.66e-01 | 100.0% | 71.4% |
| 3564215 | 71.1.1.14 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › GPCR_chapero_1 | 0.60 | 54.0 | 3.75e-01 | 100.0% | 83.0% |
| 4315860 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.59 | 51.0 | 3.30e-01 | 97.1% | 20.9% |
| 4494528 | 632.2.1.40 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF515 | 0.55 | 37.0 | 3.98e-01 | 74.3% | 87.3% |
| 3201310 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.54 | 39.0 | 4.13e-01 | 78.6% | 91.7% |
| 3440168 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.53 | 38.0 | 3.35e-01 | 78.6% | 65.2% |
| 4998720 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.52 | 41.0 | 2.78e-01 | 85.7% | 68.5% |
| 5073476 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.50 | 38.0 | 2.73e-01 | 85.7% | 28.9% |
| 3247817 | 5000.4.1.0 ↗ | alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain | 0.50 | 37.0 | 2.62e-01 | 80.0% | 38.7% |