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IMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_41038_41247
Arc-VirIMGVR_UViG_3300045988_036138-3300045988-Ga0495776_114579_41038_41247
Identity
- Kingdom:
- archaea
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-62
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.57 | 42.0 | 3.16e-01 | 82.1% | 43.6% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.58e-01 | 80.4% | 65.6% |
| 3lmmC04 | 1.10.10.2340 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 39.0 | 3.42e-01 | 80.4% | 70.1% |
| 2yvlA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.51 | 36.0 | 3.56e-01 | 94.6% | 72.4% |
| 3trkA01 | 3.90.70.110 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Alphavirus nsP2 protease domain | 0.50 | 41.0 | 3.19e-01 | 94.6% | 62.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4653754 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.57 | 45.0 | 3.06e-01 | 94.6% | 76.3% |
| 4296280 | 7523.1.1.58 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DUF5396 | 0.54 | 31.0 | 1.90e-01 | 85.7% | 7.5% |
| 5082311 | 205.1.1.33 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10 | 0.53 | 39.0 | 3.93e-01 | 87.5% | 80.0% |
| 4960046 | 205.1.1.131 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9 | 0.53 | 37.0 | 2.70e-01 | 92.9% | 24.7% |
| 5055587 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 3.92e-01 | 98.2% | 82.4% |
| 4463561 | 205.1.1.41 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4, Fer4_10 | 0.51 | 35.0 | 3.43e-01 | 82.1% | 63.1% |
| 339198 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.51 | 36.0 | 3.58e-01 | 94.6% | 73.7% |