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IMGVR_UViG_3300045988_039450-3300045988-Ga0495776_114862_48989_49582
Arc-VirIMGVR_UViG_3300045988_039450-3300045988-Ga0495776_114862_48989_49582
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 97-196
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00233__D118-220
D2
medium
residues 1-95
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h09A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.72 | 34.0 | 4.30e-01 | 72.6% | 75.0% |
| 1t07A00 | 1.10.3880.10 | Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX | 0.58 | 46.0 | 4.93e-01 | 94.7% | 97.5% |
| 3c3dA02 | 1.10.8.240 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain | 0.55 | 35.0 | 3.70e-01 | 88.4% | 70.5% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 24.0 | 3.37e-01 | 77.9% | 94.9% |
| 3l9wA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 3.84e-01 | 100.0% | 93.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3849360 | 376.1.3.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RIM2a_ZnF | 0.62 | 41.0 | 4.57e-01 | 80.0% | 85.3% |
| 3889228 | 386.1.1.66 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Spt46 | 0.59 | 32.0 | 3.53e-01 | 83.2% | 64.1% |
| 3524423 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 30.0 | 3.63e-01 | 71.6% | 87.3% |
| 3680502 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.53 | 32.0 | 2.89e-01 | 77.9% | 40.7% |
| 3598187 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.53 | 36.0 | 3.22e-01 | 70.5% | 87.9% |
| 3933206 | 376.1.3.56 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF30811 | 0.53 | 39.0 | 4.12e-01 | 81.1% | 87.1% |
| 3209317 | 376.1.1.125 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2, zf-RING_UBOX | 0.52 | 41.0 | 3.53e-01 | 85.3% | 86.5% |
| 5058552 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.51 | 27.0 | 3.53e-01 | 76.8% | 98.0% |
| 3611182 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.50 | 31.0 | 3.38e-01 | 75.8% | 73.8% |
| 3869223 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 30.0 | 3.24e-01 | 81.1% | 68.8% |
| 4150218 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.50 | 44.0 | 3.70e-01 | 96.8% | 91.9% |
| 3204103 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 29.0 | 3.42e-01 | 81.1% | 88.3% |