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IMGVR_UViG_3300045988_050077-3300045988-Ga0495776_132136_9996_10787
Arc-VirIMGVR_UViG_3300045988_050077-3300045988-Ga0495776_132136_9996_10787
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-102
Domain cluster:
rep: BML_08182015_6_5m_scaffold_1_prodigal-single.1__X__X__00169__D1-120
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01541.31 best | GIY-YIG | 38.6 | 1.50e-09 | 94.1% | 92.3% |
D2
medium
residues 127-202
Domain cluster:
rep: OP310984.1__UXD83619.1__NP274_00212__00212__D3-72
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07453.20 best | NUMOD1 | 27.0 | 5.80e-06 | 50.0% | 91.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 67.0 | 7.05e-01 | 100.0% | 95.6% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.60 | 38.0 | 3.94e-01 | 85.5% | 68.1% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.57 | 35.0 | 3.73e-01 | 85.5% | 71.2% |
| 1x9nA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.56 | 34.0 | 3.35e-01 | 85.5% | 56.0% |
| 1ktbA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 32.0 | 3.10e-01 | 84.2% | 47.3% |
| 3a21A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 33.0 | 3.12e-01 | 88.2% | 49.5% |
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.50e-01 | 90.8% | 67.5% |
| 2ww8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 3.14e-01 | 90.8% | 50.0% |
| 3h7lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.43e-01 | 85.5% | 61.3% |
| 3x17A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.30e-01 | 86.8% | 55.9% |
| 4jysB00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.50 | 38.0 | 3.47e-01 | 85.5% | 76.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4384880 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.83 | 68.0 | 6.57e-01 | 97.4% | 77.6% |
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.82 | 67.0 | 7.01e-01 | 100.0% | 94.2% |
| 4414927 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.73 | 62.0 | 6.46e-01 | 97.4% | 100.0% |
| 5067739 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 38.0 | 3.68e-01 | 88.2% | 56.5% |
| 4981612 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.60 | 39.0 | 3.73e-01 | 86.8% | 58.8% |
| 4979091 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 38.0 | 3.67e-01 | 90.8% | 57.6% |
| 3932124 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.58 | 38.0 | 2.66e-01 | 96.1% | 20.4% |
| 3601005 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 37.0 | 3.44e-01 | 90.8% | 51.6% |
| 3601329 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 36.0 | 3.38e-01 | 90.8% | 51.6% |
| 4355701 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.56 | 45.0 | 3.12e-01 | 90.8% | 30.7% |
| 3496294 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.55 | 41.0 | 3.23e-01 | 82.9% | 97.1% |
| 3256591 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 34.0 | 3.39e-01 | 89.5% | 58.7% |
| 4928070 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 36.0 | 3.28e-01 | 89.5% | 51.0% |
| 3393247 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.52 | 36.0 | 3.02e-01 | 75.0% | 99.4% |
| 3276376 | 11.1.4.34 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SdrD_B | 0.52 | 38.0 | 3.45e-01 | 90.8% | 58.0% |
| 1489706 | 11.1.1.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CelD_N | 0.52 | 37.0 | 3.37e-01 | 86.8% | 56.4% |
| 4461109 | 11.1.1.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CelD_N | 0.51 | 35.0 | 3.37e-01 | 85.5% | 60.0% |
D3
medium
residues 203-263