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IMGVR_UViG_3300045988_052827-3300045988-Ga0495776_012065_74859_75236
Arc-VirIMGVR_UViG_3300045988_052827-3300045988-Ga0495776_012065_74859_75236
Identity
- Kingdom:
- archaea
Quality
83.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-113
Domain cluster:
rep: MN524652.1__QIC50005.1__X__00001__D102-201
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 48.0 | 5.06e-01 | 100.0% | 80.4% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 42.0 | 4.70e-01 | 81.2% | 82.6% |
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 47.0 | 5.07e-01 | 100.0% | 88.3% |
| 2covG00 | 2.60.40.2450 | Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain | 0.65 | 39.0 | 4.33e-01 | 89.3% | 75.0% |
| 3d85D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 4.95e-01 | 86.6% | 82.1% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 45.0 | 4.78e-01 | 76.8% | 83.5% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 48.0 | 4.67e-01 | 82.1% | 73.6% |
| 1j0hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 47.0 | 4.55e-01 | 82.1% | 69.6% |
| 2q7nA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 4.65e-01 | 100.0% | 82.7% |
| 2q7nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 4.57e-01 | 100.0% | 80.0% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.59 | 44.0 | 4.45e-01 | 92.9% | 78.2% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 4.26e-01 | 78.6% | 81.7% |
| 1bquA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 4.08e-01 | 100.0% | 72.2% |
| 4w6yA00 | 2.60.120.1210 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 4.54e-01 | 92.9% | 91.1% |
| 3mmhA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 43.0 | 3.70e-01 | 100.0% | 50.9% |
| 3rbsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 37.0 | 4.07e-01 | 79.5% | 80.7% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 4.46e-01 | 92.0% | 75.0% |
| 3blcA00 | 2.70.98.90 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 46.0 | 3.50e-01 | 85.7% | 88.6% |
| 3x17A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 45.0 | 4.71e-01 | 100.0% | 91.2% |
| 4jgpA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 38.0 | 4.06e-01 | 100.0% | 76.8% |
| 3e0yA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 40.0 | 3.60e-01 | 100.0% | 52.9% |
| 3lifB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 38.0 | 3.55e-01 | 100.0% | 54.2% |
| 3aabB00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 39.0 | 4.07e-01 | 72.3% | 92.5% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 4.22e-01 | 81.2% | 75.4% |
| 2a73B06 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.56 | 45.0 | 4.18e-01 | 87.5% | 88.9% |
| 4en2A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.55 | 41.0 | 4.29e-01 | 93.8% | 83.7% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.55 | 41.0 | 4.22e-01 | 93.8% | 82.9% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 4.46e-01 | 83.0% | 94.7% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 47.0 | 4.68e-01 | 100.0% | 89.2% |
| 1uxbA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.54 | 47.0 | 4.05e-01 | 98.2% | 95.1% |
| 5ereA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.58e-01 | 100.0% | 63.3% |
| 3kg5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.95e-01 | 81.2% | 80.6% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 4.17e-01 | 100.0% | 80.3% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.04e-01 | 81.2% | 81.0% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.53 | 39.0 | 3.94e-01 | 77.7% | 95.5% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 40.0 | 4.16e-01 | 83.9% | 93.3% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 3.89e-01 | 82.1% | 91.0% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.52 | 42.0 | 3.89e-01 | 95.5% | 67.5% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.52 | 41.0 | 4.07e-01 | 83.9% | 80.3% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.50 | 36.0 | 3.48e-01 | 100.0% | 64.3% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3560815 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.65 | 50.0 | 4.85e-01 | 81.2% | 80.8% |
| 4927424 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 55.0 | 5.17e-01 | 92.0% | 78.5% |
| 4629425 | 11.1.1.1369 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1410 | 0.64 | 47.0 | 5.02e-01 | 78.6% | 89.5% |
| 3263022 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 47.0 | 5.23e-01 | 75.9% | 100.0% |
| 4025617 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 52.0 | 4.61e-01 | 87.5% | 85.6% |
| 3554056 | 11.1.1.134 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL12p40_C | 0.64 | 50.0 | 4.85e-01 | 83.0% | 81.6% |
| 3177162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 46.0 | 4.69e-01 | 81.2% | 90.0% |
| 3413761 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.60 | 45.0 | 4.15e-01 | 82.1% | 60.7% |
| 3473369 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 46.0 | 4.43e-01 | 81.2% | 73.8% |
| 3992859 | 389.1.1.47 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › TIL_2 | 0.60 | 34.0 | 4.27e-01 | 83.0% | 91.4% |
| 3472919 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 3.98e-01 | 81.2% | 84.4% |
| 3934347 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 4.44e-01 | 80.4% | 88.7% |
| 5007335 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 44.0 | 3.84e-01 | 92.9% | 53.9% |
| 3275102 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.58 | 51.0 | 4.53e-01 | 99.1% | 81.8% |
| 3722018 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.58 | 45.0 | 4.27e-01 | 93.8% | 70.8% |
| 3265242 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 4.60e-01 | 89.3% | 83.2% |
| 3324420 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.57 | 44.0 | 4.48e-01 | 82.1% | 89.1% |
| 3925164 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.57 | 44.0 | 4.31e-01 | 82.1% | 76.0% |
| 3263518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 4.44e-01 | 82.1% | 84.8% |
| 3371896 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.57 | 45.0 | 4.48e-01 | 85.7% | 88.2% |
| 3163957 | 881.1.1.38 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27161 | 0.57 | 44.0 | 3.78e-01 | 81.2% | 80.0% |
| 3491151 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 43.0 | 3.96e-01 | 82.1% | 84.7% |
| 3198068 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.56 | 43.0 | 4.42e-01 | 83.9% | 87.3% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 42.0 | 4.57e-01 | 99.1% | 98.9% |
| 3269002 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 4.35e-01 | 98.2% | 85.7% |
| 3555079 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.56 | 42.0 | 3.88e-01 | 80.4% | 65.5% |
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 42.0 | 4.03e-01 | 100.0% | 70.0% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.55 | 41.0 | 4.47e-01 | 100.0% | 100.0% |
| 3968971 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.55 | 41.0 | 4.45e-01 | 100.0% | 98.9% |
| 3973729 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 43.0 | 3.91e-01 | 100.0% | 62.7% |
| 3863258 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.54 | 40.0 | 4.16e-01 | 77.7% | 82.9% |
| 1560729 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.54 | 42.0 | 3.85e-01 | 81.2% | 68.8% |
| 3842698 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.54 | 41.0 | 3.03e-01 | 81.2% | 31.1% |
| 2755212 | 4169.1.1.1 ↗ | a+b three layers › Coronavirus spike protein receptor-binding domain › Coronavirus spike protein receptor-binding domain › Beta-coronavirus spike protein receptor-binding domain › bCoV_S1_RBD | 0.54 | 37.0 | 2.91e-01 | 71.4% | 79.1% |
| 3418365 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.54 | 46.0 | 3.12e-01 | 92.0% | 26.3% |
| 3878004 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.54 | 40.0 | 3.81e-01 | 81.2% | 68.6% |
| 3919886 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 4.18e-01 | 81.2% | 88.2% |
| 3935049 | 11.1.3.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like | 0.54 | 42.0 | 3.91e-01 | 86.6% | 68.7% |
| None | — | 0.53 | 41.0 | 3.00e-01 | 81.2% | 31.1% | |
| 3879388 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.53 | 44.0 | 3.79e-01 | 91.1% | 83.3% |
| 4980441 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 40.0 | 4.26e-01 | 98.2% | 95.8% |
| 3731972 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 41.0 | 3.95e-01 | 84.8% | 92.3% |
| 3442209 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 41.0 | 4.11e-01 | 83.0% | 88.7% |
| 3186464 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 42.0 | 3.98e-01 | 87.5% | 85.2% |
| 3486965 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 41.0 | 3.72e-01 | 100.0% | 62.7% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.52 | 41.0 | 3.96e-01 | 85.7% | 78.5% |
| 3919659 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.51 | 45.0 | 3.74e-01 | 94.6% | 88.9% |
| 3542360 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.51 | 39.0 | 4.08e-01 | 80.4% | 91.0% |
| 4499267 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 40.0 | 3.67e-01 | 100.0% | 63.3% |
| 4062548 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.51 | 43.0 | 3.84e-01 | 99.1% | 64.2% |
| 3699180 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.50 | 42.0 | 4.08e-01 | 93.8% | 100.0% |
| 4864011 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.50 | 38.0 | 3.97e-01 | 100.0% | 89.5% |