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IMGVR_UViG_3300045988_059912-3300045988-Ga0495776_005348_74360_74710
Arc-VirIMGVR_UViG_3300045988_059912-3300045988-Ga0495776_005348_74360_74710
Identity
- Kingdom:
- archaea
Quality
93.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-110
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nvmA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.59 | 45.0 | 3.85e-01 | 97.1% | 51.9% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.57 | 42.0 | 3.55e-01 | 91.2% | 46.4% |
| 3lidA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 34.0 | 3.03e-01 | 91.2% | 42.7% |
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 31.0 | 3.19e-01 | 86.8% | 53.0% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 39.0 | 3.31e-01 | 95.6% | 42.5% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 38.0 | 4.00e-01 | 94.1% | 80.0% |
| 3u7vA02 | 2.60.220.20 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus | 0.55 | 43.0 | 3.50e-01 | 89.7% | 87.5% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 43.0 | 3.47e-01 | 92.6% | 61.3% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 39.0 | 4.07e-01 | 92.6% | 85.7% |
| 2e8yA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 41.0 | 3.78e-01 | 88.2% | 94.4% |
| 7ct3A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 36.0 | 3.12e-01 | 97.1% | 44.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281300 | 4.1.1.426 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31188 | 0.62 | 33.0 | 3.44e-01 | 83.8% | 53.8% |
| 6662 | 4276.1.1.1 ↗ | a+b two layers › XisI-like › XisI-like › XisI-like › XisI | 0.57 | 42.0 | 3.55e-01 | 91.2% | 46.4% |
| 3406485 | 1181.1.1.0 ↗ | 0.55 | 32.0 | 3.20e-01 | 82.4% | 55.7% | |
| 4029539 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 38.0 | 3.18e-01 | 100.0% | 42.5% |
| 3801235 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 39.0 | 3.19e-01 | 80.9% | 76.4% |
| 5078510 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 2.95e-01 | 91.2% | 80.3% |
| 4953397 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.51 | 44.0 | 3.29e-01 | 98.5% | 44.6% |
| 3199325 | 241.1.1.11 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Med14 | 0.50 | 38.0 | 2.84e-01 | 80.9% | 58.9% |