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IMGVR_UViG_3300045988_100586-3300045988-Ga0495776_090630_24086_24376

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300045988_100586-3300045988-Ga0495776_090630_24086_24376 ↗
Kingdom:: archaea

Quality

74.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-46

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l66A00	2.10.260.10	Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D ›	0.61	41.0	3.91e-01	73.2%	90.6%
7zhhA02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.58	39.0	3.46e-01	70.7%	83.3%
1yfbA00	2.10.260.10	Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D ›	0.55	39.0	3.70e-01	78.0%	90.4%
3c30A02	2.20.20.100	Mainly Beta › Single Sheet › Anthopleurin-A › LuxQ periplasmic domain, C-terminal subdomain	0.55	37.0	3.32e-01	73.2%	73.4%
2lpuA00	3.30.1460.50	Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, ›	0.53	43.0	3.05e-01	100.0%	60.8%
1t6eX01	2.40.70.10	Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases	0.52	36.0	2.62e-01	87.8%	70.7%
1fi8C00	2.60.40.550	Mainly Beta › Sandwich › Immunoglobulin-like › Ecotin	0.51	36.0	3.13e-01	78.0%	88.5%
1ng2A01	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.51	35.0	3.46e-01	75.6%	68.2%
2bzyA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.50	35.0	3.11e-01	75.6%	48.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3284431	862.1.1.5 ↗	a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol	0.72	48.0	2.87e-01	70.7%	10.3%
1948837	1.1.3.2 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin	0.68	48.0	4.58e-01	75.6%	100.0%
4811950	866.1.1.1 ↗	a+b duplicates or obligate multimers › CheC-like › CheC-like › CheC-like › FliM	0.66	45.0	3.85e-01	73.2%	47.3%
5031988	1.1.3.0 ↗	beta barrels › cradle loop barrel › RIFT-related › AbrB	0.61	43.0	4.08e-01	75.6%	98.0%
5029199	386.1.1.0 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers	0.58	39.0	3.20e-01	70.7%	87.5%
5067674	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.58	41.0	3.25e-01	75.6%	37.9%
3931978	387.1.7.1 ↗	few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold › Lustrin_cystein	0.55	37.0	3.61e-01	70.7%	77.1%
4004197	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.54	36.0	2.64e-01	70.7%	82.4%
3628931	11.1.1.102 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD	0.53	42.0	2.48e-01	100.0%	23.7%
3412972	2002.3.1.0 ↗	a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase	0.52	35.0	2.12e-01	73.2%	82.1%
3624263	206.1.1.70 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1	0.50	37.0	2.26e-01	92.7%	53.5%
3790194	284.2.1.0 ↗	a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain	0.50	35.0	3.43e-01	73.2%	82.2%
184997	304.51.1.5 ↗	a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Csy4	0.50	42.0	3.28e-01	100.0%	50.0%